Summary of Study ST002518

This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR001620. The data can be accessed directly via it's Project DOI: 10.21228/M89B04 This work is supported by NIH grant, U2C- DK119886.

See: https://www.metabolomicsworkbench.org/about/howtocite.php

This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.

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Study IDST002518
Study TitleTime course 3: Growth of Eggerthella lenta in defined media with some samples receiving 13C6 stable isotope labeled arginine
Study TypeUntargeted LC-MS
Study SummaryThis dataset contains untargeted metabolomics analysis of supernatants from Eggerthella lenta DSM 2243 grown in defined EDM1 media. One set of samples grew in EDM1 containing 13C6 stable isotope labeled arginine.
Institute
University of California, San Francisco
Last NameNoecker
First NameCecilia
Address513 Parnassus Ave HSW1501, San Francisco, CA 94143
Emailcecilia.noecker@ucsf.edu
Phone415-502-3264
Submit Date2023-03-22
Raw Data AvailableYes
Raw Data File Type(s)mzML, raw(Thermo)
Analysis Type DetailLC-MS
Release Date2023-04-09
Release Version1
Cecilia Noecker Cecilia Noecker
https://dx.doi.org/10.21228/M89B04
ftp://www.metabolomicsworkbench.org/Studies/ application/zip

Select appropriate tab below to view additional metadata details:

Factors:

Subject type: Bacteria; Subject species: Eggerthella lenta (Factor headings shown in green)

mb_sample_id local_sample_id Strain ArgGroup TimePoint Time
SA253892MSA00502243 HR TP0 0
SA253893MSA00432243 HR TP0 0
SA253894MSA00292243 HR TP0 0
SA253895MSA00492243 HR TP1 20
SA253896MSA00562243 HR TP1 20
SA253897MSA00042243 HR TP1 20
SA253898MSA00322243 HR TP2 32
SA253899MSA00312243 HR TP2 32
SA253900MSA00642243 HR TP2 32
SA253901MSA00072243 HR TP3 44
SA253902MSA00142243 HR TP3 44
SA253903MSA00252243 HR TP3 44
SA253904MSA00532243 HR TP4 56
SA253905MSA00442243 HR TP4 56
SA253906MSA00602243 HR TP4 56
SA253907MSA00552243 R TP0 0
SA253908MSA00542243 R TP0 0
SA253909MSA00132243 R TP0 0
SA253910MSA00482243 R TP1 20
SA253911MSA00332243 R TP1 20
SA253912MSA00182243 R TP1 20
SA253913MSA00422243 R TP2 32
SA253914MSA00172243 R TP2 32
SA253915MSA00262243 R TP2 32
SA253916MSA00392243 R TP3 44
SA253917MSA00082243 R TP3 44
SA253918MSA00092243 R TP3 44
SA253919MSA00342243 R TP4 56
SA253920MSA00012243 R TP4 56
SA253921MSA00022243 R TP4 56
SA253878QC5- - - -
SA253879QC6- - - -
SA253880QC4- - - -
SA253881QC3- - - -
SA253882BK1- - - -
SA253883QC2- - - -
SA253884QC7- - - -
SA253885QC1- - - -
SA253886BK4- - - -
SA253887BK3- - - -
SA253888BK7- - - -
SA253889BK5- - - -
SA253890BK2- - - -
SA253891BK6- - - -
SA253922MSA0059c HR TP0 0
SA253923MSA0028c HR TP0 0
SA253924MSA0062c HR TP0 0
SA253925MSA0046c HR TP1 20
SA253926MSA0012c HR TP1 20
SA253927MSA0024c HR TP1 20
SA253928MSA0057c HR TP2 32
SA253929MSA0038c HR TP2 32
SA253930MSA0030c HR TP2 32
SA253931MSA0035c HR TP3 44
SA253932MSA0016c HR TP3 44
SA253933MSA0027c HR TP3 44
SA253934MSA0015c HR TP4 56
SA253935MSA0047c HR TP4 56
SA253936MSA0036c HR TP4 56
SA253937MSA0061c R TP0 0
SA253938MSA0045c R TP0 0
SA253939MSA0052c R TP0 0
SA253940MSA0041c R TP1 20
SA253941MSA0021c R TP1 20
SA253942MSA0010c R TP1 20
SA253943MSA0019c R TP2 32
SA253944MSA0023c R TP2 32
SA253945MSA0022c R TP2 32
SA253946MSA0006c R TP3 44
SA253947MSA0058c R TP3 44
SA253948MSA0020c R TP3 44
SA253949MSA0037c R TP4 56
SA253950MSA0040c R TP4 56
SA253951MSA0003c R TP4 56
SA253952MSA0051c R TP4 56
SA253953MSA0011c R TP4 56
SA253954MSA0063c R TP4 56
SA253955MSA0005c R TP4 56
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