Summary of Study ST001477
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR001001. The data can be accessed directly via it's Project DOI: 10.21228/M89H64 This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.
Study ID | ST001477 |
Study Title | Lipidomics dataset of PTEN deletion-induced nerve regeneration mouse model |
Study Summary | We present the lipidome of adult PTENloxP/loxP mice subjected to intravitreal injection of adeno-associated viruses expressing Cre (AAV-Cre) as a model of regeneration. At 4-week-old, PTENloxP/loxP mice were intravitreally-injected with 2-3 μl of either AAV-Cre (KO) or AAV-PLAP (control), and two weeks later optic nerve crush was performed. At indicated time-points after crush (0 days, 7 days, 14 days), mice were euthanized and optic nerves were immediately dissected out, and then flash frozen on dry ice. The Bligh and Dyer method was used for lipid extraction, followed by mass spectrometry lipid profiling with a Q-Exactive Orbitrap Liquid Chromatography-Mass Spectrometer (LC MS-MS). The raw scans were analysed with LipidSearch 4.2 and the statistical analysis was conducted through Metaboanalyst 4.0 |
Institute | University of Miami |
Last Name | Bhattacharya |
First Name | Sanjoy |
Address | 1638 NW 10th Avenue, Room 706-A, Miami, FL 33136 |
sbhattacharya@med.miami.edu | |
Phone | 305-482-4103 |
Submit Date | 2020-08-31 |
Raw Data Available | Yes |
Raw Data File Type(s) | raw(Thermo) |
Analysis Type Detail | LC-MS |
Release Date | 2020-09-10 |
Release Version | 1 |
Select appropriate tab below to view additional metadata details:
Factors:
Subject type: Mammal; Subject species: Mus musculus (Factor headings shown in green)
mb_sample_id | local_sample_id | Factor |
---|---|---|
SA124833 | C14_01 | Control |
SA124834 | C14_03 | Control |
SA124835 | C14_04 | Control |
SA124836 | C07_12 | Control |
SA124837 | C07_11 | Control |
SA124838 | C07_09 | Control |
SA124839 | C07_10 | Control |
SA124840 | C14_06 | Control |
SA124841 | C14_08 | Control |
SA124842 | C14_12 | Control |
SA124843 | C14_02 | Control |
SA124844 | C0_01 | Control |
SA124845 | C14_11 | Control |
SA124846 | C14_10 | Control |
SA124847 | C07_08 | Control |
SA124848 | C14_09 | Control |
SA124849 | C14_07 | Control |
SA124850 | C14_05 | Control |
SA124851 | C0_07 | Control |
SA124852 | C0_08 | Control |
SA124853 | C0_09 | Control |
SA124854 | C0_06 | Control |
SA124855 | C0_05 | Control |
SA124856 | C0_02 | Control |
SA124857 | C07_07 | Control |
SA124858 | C0_04 | Control |
SA124859 | C0_10 | Control |
SA124860 | C0_03 | Control |
SA124861 | C07_04 | Control |
SA124862 | C07_05 | Control |
SA124863 | C0_11 | Control |
SA124864 | C07_03 | Control |
SA124865 | C07_06 | Control |
SA124866 | C0_12 | Control |
SA124867 | C07_01 | Control |
SA124868 | C07_02 | Control |
SA124869 | P14_01 | KO |
SA124870 | P14_03 | KO |
SA124871 | P07_13 | KO |
SA124872 | P14_02 | KO |
SA124873 | P07_11 | KO |
SA124874 | P14_04 | KO |
SA124875 | P07_10 | KO |
SA124876 | P07_12 | KO |
SA124877 | P07_09 | KO |
SA124878 | P14_09 | KO |
SA124879 | P14_11 | KO |
SA124880 | P14_12 | KO |
SA124881 | P07_08 | KO |
SA124882 | P14_10 | KO |
SA124883 | P14_08 | KO |
SA124884 | P14_06 | KO |
SA124885 | P14_07 | KO |
SA124886 | P14_05 | KO |
SA124887 | P0_01 | KO |
SA124888 | P0_07 | KO |
SA124889 | P0_08 | KO |
SA124890 | P0_09 | KO |
SA124891 | P0_06 | KO |
SA124892 | P0_05 | KO |
SA124893 | P0_02 | KO |
SA124894 | P0_03 | KO |
SA124895 | P0_04 | KO |
SA124896 | P0_10 | KO |
SA124897 | P0_11 | KO |
SA124898 | P07_04 | KO |
SA124899 | P07_05 | KO |
SA124900 | P07_06 | KO |
SA124901 | P07_03 | KO |
SA124902 | P07_02 | KO |
SA124903 | P0_12 | KO |
SA124904 | P07_01 | KO |
SA124905 | P07_07 | KO |
Showing results 1 to 73 of 73 |