Summary of Study ST002482

This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR001604. The data can be accessed directly via it's Project DOI: 10.21228/M8CB0R This work is supported by NIH grant, U2C- DK119886.

See: https://www.metabolomicsworkbench.org/about/howtocite.php

This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.

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Study IDST002482
Study TitleNon-targeted screening of natural products from 288 fungal endophytes from Canadian fruit crops
Study SummaryFungal endophytes often live in symbiotic relationships with various plant hosts, conferring positive effects to their host organism. These endophytes frequently produce a wide variety of secondary metabolites with bioactivities that are often responsible for the beneficial effects seen in the host, such as antifungal or anti-insectan activity. A large group of fungal endophytes isolated from Canadian fruit crops including blueberries, raspberries, cranberries, grapes, and pears, was analyzed using molecular networking by GNPS in an effort to simplify the process of examining a large dataset. Molecular networking increased the speed and efficiency of examining this dataset, permitting the dereplication of 60 known compounds and the discovery of seven putative novel compounds, which will be purified, characterized, and tested for bioactivity in future studies.
Institute
Agriculture and Agri-Food Canada
Last NameRenaud
First NameJustin
Address1391 Sandford Street, London, Ontario, LN5V 4T3, Canada
Emailjustin.renaud@agr.gc.ca
Phone519-953-6698
Submit Date2022-01-06
Raw Data AvailableYes
Raw Data File Type(s)mzML
Analysis Type DetailLC-MS
Release Date2023-07-02
Release Version1
Justin Renaud Justin Renaud
https://dx.doi.org/10.21228/M8CB0R
ftp://www.metabolomicsworkbench.org/Studies/ application/zip

Select appropriate tab below to view additional metadata details:

Factors:

Subject type: Fungi; Subject species: Alternaria/Aspergillus/Botrytis/Anthostomella/Claussenomyces/Devriesia/Godronia/Leptodontidium/Mycosphaerella/Protoventuria/Rhizosphaera/Spondycladiopsis/Tumularia/Cladosporium/Colletotrichum/Coniochaeta/Coniothyrium/Creosphaeria/Cryptosporella/Cytospora/Diaporthe/Didymella/Discostroma/Epicoccum/Fusarium/Geastrumia/Gloeophyllum/Guignardia/Herpotrichia/Hypoxylon/Kretzschmaria/Lachnellula/Lachnum/Lophiostoma/Microdochium/Mollisia/Nemania/Nigrospora/Paramycosphaerella/Paraphaeosphaeria/Penicillium/Phaeoacremonium/Phialocephala/Phomopsis/Phyllosticta/Pilidium/Plagiostoma/Pleonectria/Proliferodiscus/Pseudoplectania/Pyrenochaeta/Pyrenopeziza/Ramularia/Rhytismataceae/Sarea/Seimatosporium/Setomelanomma/Sphaerulina/Stemphylium/Trichaptum/Varicosporium/Venturia/Wettsteinina/Xylaria (Factor headings shown in green)

mb_sample_id local_sample_id Type
SA248268PDA.blank.05Media | Genus:- | Full name:- | Host:-
SA248269PDA.blank.03Media | Genus:- | Full name:- | Host:-
SA248270PDA.blank.04Media | Genus:- | Full name:- | Host:-
SA248271PDA.blank.02Media | Genus:- | Full name:- | Host:-
SA248272PDA.blank.01Media | Genus:- | Full name:- | Host:-
SA248273QC.endo.16Quality Control | Genus:- | Full name:- | Host:-
SA248274QC.endo.15Quality Control | Genus:- | Full name:- | Host:-
SA248275QC.endo.13Quality Control | Genus:- | Full name:- | Host:-
SA248276QC.endo.17Quality Control | Genus:- | Full name:- | Host:-
SA248277QC.endo.14Quality Control | Genus:- | Full name:- | Host:-
SA248278QC.endo.21Quality Control | Genus:- | Full name:- | Host:-
SA248279QC.endo.22Quality Control | Genus:- | Full name:- | Host:-
SA248280QC.endo.12Quality Control | Genus:- | Full name:- | Host:-
SA248281QC.endo.20Quality Control | Genus:- | Full name:- | Host:-
SA248282QC.endo.19Quality Control | Genus:- | Full name:- | Host:-
SA248283QC.endo.18Quality Control | Genus:- | Full name:- | Host:-
SA248284QC.endo.08Quality Control | Genus:- | Full name:- | Host:-
SA248285QC.endo.04Quality Control | Genus:- | Full name:- | Host:-
SA248286QC.endo.03Quality Control | Genus:- | Full name:- | Host:-
SA248287QC.endo.02Quality Control | Genus:- | Full name:- | Host:-
SA248288QC.endo.01Quality Control | Genus:- | Full name:- | Host:-
SA248289QC.endo.06Quality Control | Genus:- | Full name:- | Host:-
SA248290QC.endo.07Quality Control | Genus:- | Full name:- | Host:-
SA248291QC.endo.10Quality Control | Genus:- | Full name:- | Host:-
SA248292QC.endo.09Quality Control | Genus:- | Full name:- | Host:-
SA248293QC.endo.23Quality Control | Genus:- | Full name:- | Host:-
SA248294QC.endo.11Quality Control | Genus:- | Full name:- | Host:-
SA248295QC.endo.05Quality Control | Genus:- | Full name:- | Host:-
SA248296QC.endo.31Quality Control | Genus:- | Full name:- | Host:-
SA248297QC.endo.30Quality Control | Genus:- | Full name:- | Host:-
SA248298QC.endo.29Quality Control | Genus:- | Full name:- | Host:-
SA248299QC.endo.25Quality Control | Genus:- | Full name:- | Host:-
SA248300QC.endo.24Quality Control | Genus:- | Full name:- | Host:-
SA248301QC.endo.28Quality Control | Genus:- | Full name:- | Host:-
SA248302QC.endo.27Quality Control | Genus:- | Full name:- | Host:-
SA248303QC.endo.32Quality Control | Genus:- | Full name:- | Host:-
SA248304QC.endo.26Quality Control | Genus:- | Full name:- | Host:-
SA248305E.144Sample | Genus:Alpinaria | Full name:Alpinaria cf. rhododendri | Host:Highbush blueberry
SA248306E.019Sample | Genus:Alpinaria | Full name:Alpinaria cf. rhododendri | Host:Lowbush blueberry
SA248307E.017Sample | Genus:Alpinaria | Full name:Alpinaria cf. rhododendri | Host:Lowbush blueberry
SA248308E.122Sample | Genus:Alternaria | Full name:Alternaria alternata | Host:Lowbush blueberry
SA248309E.169Sample | Genus:Alternaria | Full name:Alternaria arborescens | Host:Raspberry
SA248310E.125Sample | Genus:Alternaria | Full name:Alternaria arborescens | Host:Raspberry
SA248311E.145Sample | Genus:Alternaria | Full name:Alternaria arborescens | Host:Raspberry
SA248312E.370Sample | Genus:Alternaria | Full name:Alternaria cf. alternata | Host:Blueberry
SA248313E.171Sample | Genus:Alternaria | Full name:Alternaria infectoria | Host:Highbush blueberry
SA248314E.172Sample | Genus:Anthostomella | Full name:Anthostomella sp. | Host:Grape
SA248315E.300Sample | Genus:Aposphaeria | Full name:Aposphaeria corallinolutea | Host:Blueberry
SA248316E.362Sample | Genus:Aposphaeria | Full name:Aposphaeria corallinolutea | Host:Blueberry
SA248317E.007Sample | Genus:Articulospora | Full name:Articulospora atra | Host:Cranberry
SA248318E.068Sample | Genus:Articulospora | Full name:Articulospora atra | Host:Cranberry
SA248319E.308Sample | Genus:Aspergillus | Full name:Aspergillus amstelodami | Host:Blueberry
SA248320E.163Sample | Genus:Aureobasidium | Full name:Aureobasidium cf. subglaciale | Host:Highbush blueberry
SA248321E.064Sample | Genus:Barbatosphaeriaceae | Full name:Barbatosphaeriaceae sp. | Host:Highbush blueberry
SA248322E.004Sample | Genus:Botrytis | Full name:Botrytis cinerea | Host:Cranberry
SA248323E.360Sample | Genus:Botrytis | Full name:Botrytis cinerea | Host:Lowbush blueberry
SA248324E.220Sample | Genus:Camaropella | Full name:Camaropella sp. | Host:Grape
SA248325E.041Sample | Genus:Casaresia | Full name:Casaresia cf. sphagnorum | Host:Lowbush blueberry
SA248326E.018Sample | Genus:Chaetopsis | Full name:Chaetopsis sp. | Host:Lowbush blueberry
SA248327E.335Sample | Genus:Cladosporium | Full name:Cladosporium allicinum | Host:Lowbush blueberry
SA248328E.310Sample | Genus:Cladosporium | Full name:Cladosporium cf. cladosporioides | Host:Blueberry
SA248329E.237Sample | Genus:Colletotrichum | Full name:Colletotrichum cf. truncatum | Host:Blueberry
SA248330E.262Sample | Genus:Colletotrichum | Full name:Colletotrichum fioriniae | Host:Blueberry
SA248331E.087Sample | Genus:Coniochaeta | Full name:Coniochaeta cf. marina | Host:Lowbush blueberry
SA248332E.051Sample | Genus:Coniochaeta | Full name:Coniochaeta cf. marina | Host:Lowbush blueberry
SA248333E.026Sample | Genus:Coniochaeta | Full name:Coniochaeta cf. marina | Host:Lowbush blueberry
SA248334E.203Sample | Genus:Coniothyrium | Full name:Coniothyrium ferrarisianum | Host:Grape
SA248335E.101Sample | Genus:Creosphaeria | Full name:Creosphaeria sassafras | Host:Grape
SA248336E.236Sample | Genus:Creosphaeria | Full name:Creosphaeria sassafras | Host:Grape
SA248337E.197Sample | Genus:Cryptosporella | Full name:Cryptosporella sp. | Host:Blueberry
SA248338E.368Sample | Genus:Cytospora | Full name:Cytospora cf. cedri | Host:Blueberry
SA248339E.337Sample | Genus:Cytospora | Full name:Cytospora ribis | Host:Lowbush blueberry
SA248340E.062Sample | Genus:Diaporthe | Full name:Diaporthe phaseolorum | Host:Highbush blueberry
SA248341E.180Sample | Genus:Diaporthe | Full name:Diaporthe vaccinii | Host:Blueberry
SA248342E.229Sample | Genus:Diaporthe | Full name:Diaporthe vaccinii | Host:Blueberry
SA248343E.174Sample | Genus:Diaporthe | Full name:Diaporthe vaccinii | Host:Blueberry
SA248344E.198Sample | Genus:Diaporthe | Full name:Diaporthe vaccinii | Host:Blueberry
SA248345E.066Sample | Genus:Didymella | Full name:Didymella pomorum | Host:Highbush blueberry
SA248346E.016Sample | Genus:Didymella | Full name:Didymella sp. | Host:Lowbush blueberry
SA248347E.048Sample | Genus:Discosia | Full name:Discosia rubi | Host:Highbush blueberry
SA248348E.188Sample | Genus:Dothideaceae | Full name:Dothideaceae sp. | Host:Blueberry
SA248349E.193Sample | Genus:Dothideaceae | Full name:Dothideaceae sp. | Host:Blueberry
SA248350E.191Sample | Genus:Dothideaceae | Full name:Dothideaceae sp. | Host:Blueberry
SA248351E.055Sample | Genus:Dothideaceae | Full name:Dothideaceae sp. | Host:Cranberry
SA248352E.056Sample | Genus:Dothideaceae | Full name:Dothideaceae sp. | Host:Cranberry
SA248353E.038Sample | Genus:Dothideaceae | Full name:Dothideaceae sp. | Host:Cranberry
SA248354E.022Sample | Genus:Dothideaceae | Full name:Dothideaceae sp. | Host:Lowbush blueberry
SA248355E.120Sample | Genus:Dothideaceae | Full name:Dothideaceae sp. | Host:Lowbush blueberry
SA248356E.070Sample | Genus:Dothideaceae | Full name:Dothideaceae sp. | Host:Lowbush blueberry
SA248357E.060Sample | Genus:Dothideaceae | Full name:Dothideaceae sp. | Host:Lowbush blueberry
SA248358E.069Sample | Genus:Dothideaceae | Full name:Dothideaceae sp. | Host:Lowbush blueberry
SA248359E.152Sample | Genus:Dothideaceae | Full name:Dothideaceae sp. | Host:Lowbush blueberry
SA248360E.027Sample | Genus:Dothideaceae | Full name:Dothideaceae sp. | Host:Lowbush blueberry
SA248361E.029Sample | Genus:Dothideaceae | Full name:Dothideaceae sp. | Host:Lowbush blueberry
SA248362E.025Sample | Genus:Dothideaceae | Full name:Dothideaceae sp. | Host:Lowbush blueberry
SA248363E.158Sample | Genus:Dothideaceae | Full name:Dothideaceae sp. | Host:Lowbush blueberry
SA248364E.021Sample | Genus:Dothideaceae | Full name:Dothideaceae sp. | Host:Lowbush blueberry
SA248365E.141Sample | Genus:Dothideaceae | Full name:Dothideaceae sp. | Host:Lowbush blueberry
SA248366E.023Sample | Genus:Dothideaceae | Full name:Dothideaceae sp. | Host:Lowbush blueberry
SA248367E.012Sample | Genus:Dothideaceae | Full name:Dothideaceae sp. | Host:Lowbush blueberry
Showing page 1 of 4     Results:    1  2  3  4  Next     Showing results 1 to 100 of 325
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