Summary of Study ST001687
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR001085. The data can be accessed directly via it's Project DOI: 10.21228/M8FT4Q This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.
Study ID | ST001687 |
Study Title | Non-transformed cells respond to fat by inducing glucose metabolism |
Study Summary | C57BL/6N mice were obtained from the KU Leuven animal laboratory. 2-week old mice were injected i.p. diethylnitrosamine (DEN, 25 mg/Kg) in phosphate buffered saline (3.17 mg/ml).s At 6-weeks of age, mice were randomized into two groups: control diet (CD, E15742-33 ssniff Spezialdiäten GmbH) or high fat diet (HFD, S8655-E220 sniff Spezialdiäten GmbH). At endpoint, mice were sacrificed by injecting approximately 50 µl of a 60 mg/ml Nembutal solution (Vetoquinol). Tissues were immediately excised, washed in ice-cold saline, placed into pre-labelled bags and frozen using a liquid nitrogen-cooled biosqueezer. The bags were then placed in liquid nitrogen until all collections were finished and finally stored at -80°C until further processing. Where necessary tumors were rapidly separated from normal tissue prior to freezing with tumor and normal tissue being stored separately. |
Institute | VIB-KU Leuven Center for Cancer Biology |
Department | Department of Oncology |
Laboratory | Laboratory of Cellular Metabolism and Metabolic Regulation |
Last Name | Fendt |
First Name | Sarah-Maria |
Address | ON IV Herestraat 49 - box 912 3000 Leuven |
sarah-maria.fendt@kuleuven.be | |
Phone | +32 16 37 32 61 |
Submit Date | 2021-02-04 |
Num Groups | 4 |
Total Subjects | 16 |
Num Males | 16 |
Raw Data Available | Yes |
Raw Data File Type(s) | mzML |
Analysis Type Detail | LC-MS |
Release Date | 2021-02-27 |
Release Version | 1 |
Select appropriate tab below to view additional metadata details:
Combined analysis:
Analysis ID | AN002754 | AN002755 |
---|---|---|
Analysis type | MS | MS |
Chromatography type | HILIC | HILIC |
Chromatography system | Shimadzu Nexera X2 | Shimadzu Nexera X2 |
Column | Waters Xbridge Amide (150 x 4.6mm,3.5um) | Waters Xbridge Amide (150 x 4.6mm,3.5um) |
MS Type | ESI | ESI |
MS instrument type | Triple quadrupole | Triple quadrupole |
MS instrument name | ABI Sciex 6500+ QTRAP | ABI Sciex 6500+ QTRAP |
Ion Mode | POSITIVE | NEGATIVE |
Units | nmol lipid/mg DNA | nmol lipid/mg DNA |
MS:
MS ID: | MS002551 |
Analysis ID: | AN002754 |
Instrument Name: | ABI Sciex 6500+ QTRAP |
Instrument Type: | Triple quadrupole |
MS Type: | ESI |
MS Comments: | - |
Ion Mode: | POSITIVE |
MS ID: | MS002552 |
Analysis ID: | AN002755 |
Instrument Name: | ABI Sciex 6500+ QTRAP |
Instrument Type: | Triple quadrupole |
MS Type: | ESI |
MS Comments: | - |
Ion Mode: | NEGATIVE |