Summary of Study ST001163
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000747. The data can be accessed directly via it's Project DOI: 10.21228/M8469M This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.
Study ID | ST001163 |
Study Title | Variability in metabolomic profiles among unique genotypes of Acropora cervicornis (part-II) |
Study Summary | We hypothesized that each of the three genotypes tested would have unique metabolomic profiles. These data increase our basic knowledge of the coral metabolome and represent an important step toward linking genotype, phenotype, and metabolome in reef-building corals. |
Institute | University of Florida |
Department | Florida Aquarium Center for Conservation |
Last Name | Patterson |
First Name | Joshua |
Address | 529 Estuary Shore Lane, Apollo Beach, FL 33572 |
joshpatterson@ufl.edu | |
Phone | 813-419-4917 |
Submit Date | 2019-03-11 |
Num Groups | 3 |
Total Subjects | 16 |
Raw Data File Type(s) | raw(Thermo) |
Analysis Type Detail | LC-MS |
Release Date | 2020-03-11 |
Release Version | 1 |
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Sample Preparation:
Sampleprep ID: | SP001236 |
Sampleprep Summary: | Corol holobiont extract (in methonol) was added to double distilled water (1:2 v/v of sample to water), then flash freeze lyophilized (Labconco) until dry. Lyophilized dry powder was re-suspended in phosphate buffer in deuterium oxide at pH 7. The final volume for the 1H-NMR samples was 60 μL (in a 1.5 mm O.D. tube) with 90 % (v/v) of deuterated 50 mM sodium phosphate buffer (pH 7) with 2 mM of ethylene diamine tetra-acetic acid (EDTA). The remaining 10 % (v/v) was occupied by an internal standard [5 mM D6-4,4-dimethyl-4-silapentane-1-sulfonic acid (DSS-D6) and 0.2% sodium azide in deuterated environment; Chenomx, Inc.]. |
Processing Method: | Lyophilization |
Processing Storage Conditions: | -80℃ |
Extract Storage: | -80℃ |