Summary of Study ST001125
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000754. The data can be accessed directly via it's Project DOI: 10.21228/M8709G This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.
Study ID | ST001125 |
Study Title | WT and ΔSPT cultures of B. thetaiotaomicron and B. ovatus grown BHI liquid media (part I) |
Study Summary | Lipid profiling was applied to WT and ΔSPT cultures of B. thetaiotaomicron and B. ovatus grown BHI liquid media revealing a greater variety of Bacteroides-derived sphingolipids than previously recognized, including ceramide phosphoinositol and deoxy-sphingolipids. |
Institute | Broad Institute of MIT and Harvard |
Department | Gastrointestinal Unit, Center for the Study of Inflammatory Bowel Disease, University Medical Center Groningen |
Last Name | Avila-Pacheco |
First Name | Julian |
Address | 415 Main Street |
jravilap@broadinstitute.org | |
Phone | 617-714-8264 |
Submit Date | 2019-01-15 |
Num Groups | 4 |
Total Subjects | 8 |
Raw Data Available | Yes |
Raw Data File Type(s) | raw(Thermo) |
Analysis Type Detail | LC-MS |
Release Date | 2019-03-06 |
Release Version | 1 |
Select appropriate tab below to view additional metadata details:
Subject:
Subject ID: | SU001186 |
Subject Type: | Bacteria |
Subject Species: | Bacteroides thetaiotaomicron VPI-5482;Bacteroides ovatus ATCC 8483 |
Taxonomy ID: | 226186;411476 |
Genotype Strain: | WT (VPI-5482), SPT K.O. (BT_0870), (ATCC_8483), SPT K.O. (BACOVA_02588) |
Age Or Age Range: | 411476 |
Cell Biosource Or Supplier: | ATCC |
Cell Strain Details: | Wild type Bacteroides strains and serine palmitoyltransferase (SPT) knockouts |
Subject Comments: | Grown in BHI Media (Bacteroides tethaiotamicron, Bateroides ovatus : VPI-5482/ATCC_8483) |