Summary of project PR000018
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000018. The data can be accessed directly via it's Project DOI: 10.21228/M8Z59Q This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
| Project ID: | PR000018 |
| Project DOI: | doi: 10.21228/M8Z59Q |
| Project Title: | Isotopic Ratio Outlier Analysis Global Metabolomics ofCaenorhabditis elegans |
| Project Type: | IROA labeling study |
| Project Summary: | We demonstrate the global metabolic analysis ofCaenorhabditis elegansstress responses using a mass-spectrometry-based technique called isotopic ratio outlier analysis (IROA). In an IROA protocol, control and experimental samples are isotopically labeled with 95 and 5%13C, and the two sample populations are mixed together for uniform extraction, sample preparation, and LC-MS analysis.To illustrate the utility of IROA for global metabolomics, we exposed wild-type (N2) worms to a heat shock (30 min heat shock at 33 C), which causes significant, widespread changes in metabolism. We collected and analyzed material from the exometabolome (all material that worms release in the supernatant) and the endometabolome (homogenized total extracts from the worm bodies). |
| Institute: | University of Florida |
| Department: | Biochemistry & Molecular Biology |
| Laboratory: | Edison |
| Last Name: | Edison |
| First Name: | Arthur |
| Address: | R3-226 Academic Research Building, Department of Biochemistry & Molecular Biology, PO Box 100245, Gainesville, FL 32610-0245 |
| Email: | aedison@ufl.edu |
| Phone: | (352) 392-4535 |
Summary of all studies in project PR000018
| Study ID | Study Title | Species | Institute | Analysis(* : Contains Untargted data) | Release Date | Version | Samples | Download(* : Contains raw data) |
|---|---|---|---|---|---|---|---|---|
| ST000019 | Determine purity and quality of IROA labelled glucose | Caenorhabditis elegans | University of Florida | MS | 2014-03-05 | 1 | 3 | Uploaded data (89.4M)* |
| ST000019 | Determine purity and quality of IROA labelled glucose | Caenorhabditis elegans | University of Florida | NMR | 2014-03-05 | 1 | 3 | Uploaded data (89.4M)* |
| ST000040 | Heatshock response of C. elegans using IROA (I) | Caenorhabditis elegans | University of Florida | MS | 2014-03-05 | 1 | 16 | Uploaded data (3.2G)* |
