Summary of project PR000733
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000733. The data can be accessed directly via it's Project DOI: 10.21228/M8XM40 This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
| Project ID: | PR000733 |
| Project DOI: | doi: 10.21228/M8XM40 |
| Project Title: | Computational metabolomics to characterize metabolites in stable isotope-labelled organisms. |
| Project Summary: | We developed a computational metabolomics workflow to characterize metabolite structures by using the set of fully 13C-labelled and non-labelled LC-MS/MS data. The platform was applied to structure elucidations for 31 tissues of 12 plant species, resulting in the assignments of 1,092 structures and 344 formulas to 3,604 carbon-determined metabolite ions. We also applied the methodology to find the trait-metabolite associations in natural accessions of Arabidopsis thaliana. |
| Institute: | RIKEN |
| Department: | Center for Sustainable Resource Science |
| Laboratory: | Metabolome Informatics Research Team |
| Last Name: | Tsugawa |
| First Name: | Hiroshi |
| Address: | 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa, 230-0045, Japan |
| Email: | hiroshi.tsugawa@riken.jp |
| Phone: | +81-45-503-9618 |
Summary of all studies in project PR000733
| Study ID | Study Title | Species | Institute | Analysis(* : Contains Untargted data) | Release Date | Version | Samples | Download(* : Contains raw data) |
|---|---|---|---|---|---|---|---|---|
| ST001095 | Data resource for fully 13C labelled and non-labelled plant tissues (part-I) | Allium cepa;Arabidopsis thaliana;Glycine max;Glycyrrhiza glabra | RIKEN | MS* | 2018-12-11 | 1 | 62 | Uploaded data (4.7G)* |
| ST001096 | Arabidopsis thaliana 25 accessions | Arabidopsis thaliana | RIKEN | MS* | 2018-12-11 | 1 | 150 | Uploaded data (11.9G)* |
