Summary of project PR001024

This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR001024. The data can be accessed directly via it's Project DOI: 10.21228/M8B984 This work is supported by NIH grant, U2C- DK119886.

See: https://www.metabolomicsworkbench.org/about/howtocite.php

Project ID: PR001024
Project DOI:doi: 10.21228/M8B984
Project Title:Role of Diet in the Reconstitution of the Human Gut Microbiome and its Metabolome
Project Type:Observational study
Project Summary:We studied the impact of three divergent diets, vegan, omnivore, and a synthetic enteral nutrition (EEN) diet lacking fiber, on the human gut microbiome and its metabolome in a longitudinal analysis that included a microbiota depletion intervention. Hybrid nontargeted LC-MS methods were used to profile stool and plasma metabolites.
Institute:Broad Institute of MIT and Harvard
Last Name:Clish
First Name:Clary
Address:415 Main Street, Cambridge, MA, 02142, USA
Email:clary@broadinstitute.org
Phone:617-714-7654
Funding Source:Crohn’s & Colitis Foundation, P30 DK 050306, PennCHOP Microbiome Program, and the Penn Center for Nutritional Science and Medicine
Contributors:Ceylan Tanes, Kyle Bittinger, Yuan Gao, Elliot S. Friedman, Lisa Nessel, Unmesha Roy Paladhi, Lillian Chau, Erika Panfen, Michael A. Fischbach, Jonathan Braun, Ramnik J. Xavier, Clary B. Clish, Hongzhe Li, Frederic D. Bushman, James D. Lewis, Gary D. Wu

Summary of all studies in project PR001024

Study IDStudy TitleSpeciesInstituteAnalysis
(* : Contains Untargted data)
Release
Date
VersionSamplesDownload
(* : Contains raw data)
ST001519 Stool metabolites of known identity profiled using hybrid nontargeted methods (part-I) Homo sapiens Broad Institute of MIT and Harvard MS 2021-04-01 1 166 Uploaded data (148.3G)*
ST001520 Stool unknowns profiled using hybrid nontargeted methods (part-II) Homo sapiens Broad Institute of MIT and Harvard MS* 2021-04-01 1 166 Uploaded data (33.1M)*
ST001521 Plasma metabolites of known identity profiled using hybrid nontargeted methods (part-III) Homo sapiens Broad Institute of MIT and Harvard MS 2021-04-01 1 160 Not available
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