Summary of project PR001582
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR001582. The data can be accessed directly via it's Project DOI: 10.21228/M86Q7N This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
Project ID: | PR001582 |
Project DOI: | doi: 10.21228/M86Q7N |
Project Title: | Bloody Mary (BM21)- Serial mixtures of vegetable juice/water and human plasma. |
Project Summary: | Metabolomics holds the promise to measure and quantify small molecules comprehensively in biological systems, and LC-MS (liquid chromatography coupled mass spectrometry) has become the leading technology in the field. Significant challenges still exist in the computational processing of data from LC-MS metabolomic experiments into metabolite features, including provenance and reproducibility of the current software tools. We present here, an experiment designed as serial mixtures of vegetable juice/Water and human plasma at varying ratios, nicknamed “Bloody Mary 21(BM21) to test semi-quantification at –omics scale. A subset of features are expected to have their peak areas correlated with the mixing ratio. This dataset provides an opportunity to be used as benchmark to assess the performance in quantification of processing softwares. |
Institute: | The Jackson Laboratory for Genomic Medicine |
Laboratory: | Shuzhao Li Lab |
Last Name: | Siddiqa |
First Name: | Amnah |
Address: | 10 Discovery Dr, Farmington, CT 06032 |
Email: | amnah.siddiqa@jax.org |
Phone: | 4049187223 |
Summary of all studies in project PR001582
Study ID | Study Title | Species | Institute | Analysis(* : Contains Untargted data) | Release Date | Version | Samples | Download(* : Contains raw data) |
---|---|---|---|---|---|---|---|---|
ST002454 | Bloody Mary (BM21)- Serial mixtures of vegetable juice /water and human plasma. | Homo sapiens | The Jackson Laboratory for Genomic Medicine | MS* | 2023-02-01 | 1 | 180 | Uploaded data (10.1G)* |