Summary of project PR001856

This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR001856. The data can be accessed directly via it's Project DOI: 10.21228/M8T42G This work is supported by NIH grant, U2C- DK119886.

See: https://www.metabolomicsworkbench.org/about/howtocite.php

Project ID: PR001856
Project DOI:doi: 10.21228/M8T42G
Project Title:Glycine homeostasis requires reverse SHMT flux
Project Type:LCMS metabolomics
Project Summary:The folate-dependent enzyme serine hydroxymethyltransferase (SHMT) reversibly converts serine into glycine and a tetrahydrofolate-bound one-carbon unit. Such one-carbon unit production plays a critical role in development, the immune system, and cancer. Using rodent models, here we show that the whole-body SHMT flux acts to net consume rather than produce glycine. Pharmacological inhibition of whole-body SHMT1/2 and genetic knockout of liver SHMT2 elevated circulating glycine levels up to eight-fold. Stable isotope tracing revealed that the liver converts glycine to serine, which is then converted by serine dehydratase into pyruvate and burned in the tricarboxylic acid cycle. In response to diets deficient in serine and glycine, de novo biosynthetic flux was unaltered but SHMT2- and serine dehydratase-mediated catabolic flux was lower. Thus, glucose-derived serine synthesis does not respond to systemic demand. Instead, circulating serine and glycine homeostasis is maintained through variable consumption, with liver SHMT2 a major glycine-consuming enzyme.
Institute:Princeton University
Department:Department of Chemistry
Laboratory:Josh Rabinowitz
Last Name:McBride
First Name:Matthew
Address:Carl Icahn Lab, South Drive, Princeton, NJ 08544
Email:matthewmcbride@princeton.edu
Phone:8567457389

Summary of all studies in project PR001856

Study IDStudy TitleSpeciesInstituteAnalysis
(* : Contains Untargted data)
Release
Date
VersionSamplesDownload
(* : Contains raw data)
ST002980 Water soluble metabolomics in mice upon loss of SHMT Mus musculus Princeton University MS* 2023-12-12 1 36 Uploaded data (918.6M)*
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