Summary of project PR002136
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR002136. The data can be accessed directly via it's Project DOI: 10.21228/M8HN84 This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
| Project ID: | PR002136 |
| Project DOI: | doi: 10.21228/M8HN84 |
| Project Title: | MetaboSERV - a platform for selecting, exchanging, and visualizing metabolomics data with controlled data access |
| Project Type: | Research Publication, Software development |
| Project Summary: | The growing number of metabolomics studies, based on high-dimensional data measured by hyphenated mass spectrometry (MS) and/or nuclear magnetic resonance (NMR) spectroscopy, has sparked the creation of several public metabolomics data repositories. Each repository emphasizes different aspects regarding data selection and representation, but most offer only limited options for privacy-preserving data sharing. We present MetaboSERV, an open-source, browser-based metabolomics platform dedicated to the selection, integration and sharing of quantitative metabolomics data and metadata with controlled data access. MetaboSERV aims to aid researchers in analyzing their results by facilitating means to browse, visualize and compare data across available data sets. It provides different access control functionalities, creating an environment in which data can be shared safely in a privacy-preserving manner to support collaborative and interdisciplinary research. Furthermore, it is designed to be extensible and adaptable to existing data management infrastructures through the creation of self-managed MetaboSERV instances, for which we provide the source code and a set of pre-built Docker images. |
| Institute: | Hannover Medical School |
| Department: | Peter L. Reichertz Institute for Medical Informatics |
| Last Name: | Zacharias |
| First Name: | Helena |
| Address: | Carl-Neuberg-Str. 1, 30625 Hannover, Germany |
| Email: | zacharias.helena@mh-hannover.de |
| Phone: | +49 511/532-30881 |
| Funding Source: | Bundesministerium für Bildung und Forschung (BMBF), e:Med initiative |
| Contributors: | Tim Tucholski, Angela Maennel, Yacoub Abelard Njipouombe Nsangou, Sven Schuchardt, Matthias Gruber, Fabian Kellermeier, Katja Dettmer, Peter J. Oefner, Wolfram Gronwald, Michael Altenbuchinger, Jürgen Dönitz and Helena U. Zacharias |
Summary of all studies in project PR002136
| Study ID | Study Title | Species | Institute | Analysis(* : Contains Untargted data) | Release Date | Version | Samples | Download(* : Contains raw data) |
|---|---|---|---|---|---|---|---|---|
| ST003477 | Biocrates Test | Homo sapiens | Hannover Medical School | MS | 2024-10-03 | 1 | 9 | Uploaded data (2.6M)* |
