Summary of Study ST000011
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000010. The data can be accessed directly via it's Project DOI: 10.21228/M8VC73 This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
| Study ID | ST000011 |
| Study Title | African Metabolomics |
| Study Type | MS analysis |
| Study Summary | Compare metabolomic, phenotypic and genetic diversity across various groups of Africans. |
| Institute | University of Michigan |
| Laboratory | Tishkoff (University of Pennsylvania) |
| Last Name | Thompson |
| First Name | Simon |
| simontho@upenn.edu | |
| Submit Date | 2013-04-04 |
| Num Groups | 8 |
| Total Subjects | 40 |
| Raw Data Available | No |
| Analysis Type Detail | LC-MS |
| Release Date | 2013-05-04 |
| Release Version | 1 |
Select appropriate tab below to view additional metadata details:
Project:
| Project ID: | PR000010 |
| Project DOI: | doi: 10.21228/M8VC73 |
| Project Title: | African Studies |
| Project Type: | MS analysis |
| Project Summary: | Compare metabolomic, phenotypic and genetic diversity across various groups of Africans. |
| Institute: | University of Pennsylvania |
| Laboratory: | Tishkoff (University of Pennsylvania) |
| Last Name: | Thompson |
| First Name: | Simon |
| Email: | simontho@upenn.edu |
Subject:
| Subject ID: | SU000013 |
| Subject Type: | Human cells |
| Subject Species: | Homo sapiens |
| Taxonomy ID: | 9606 |
| Species Group: | Mammals |
Factors:
Subject type: Human cells; Subject species: Homo sapiens (Factor headings shown in green)
| mb_sample_id | local_sample_id | COLLECTION_COUNTRY | ETHNICITY_ASSIGNED | gender | SUBJECT_FASTING | SUBJECT_ILLNESS | SUBJECT_SMOKER |
|---|---|---|---|---|---|---|---|
| SA000585 | S00010827 | ETHIOPIA | AMHARA | male | N | healthy | N |
| SA000586 | S00010835 | ETHIOPIA | AMHARA | male | Y | healthy | N |
| SA000587 | S00010843 | ETHIOPIA | AMHARA | male | Y | healthy | N |
| SA000588 | S00010851 | ETHIOPIA | AMHARA | male | Y | healthy | N |
| SA000589 | S00010859 | ETHIOPIA | AMHARA | male | Y | healthy | N |
| SA000579 | S00010779 | ETHIOPIA | ARGOBBA | female | N | sick | N |
| SA000576 | S00010755 | ETHIOPIA | ARGOBBA | female | Y | sick | N |
| SA000578 | S00010771 | ETHIOPIA | ARGOBBA | male | NA | sick | Y |
| SA000575 | S00010747 | ETHIOPIA | ARGOBBA | male | N | sick | N |
| SA000577 | S00010763 | ETHIOPIA | ARGOBBA | male | N | sick | N |
| SA000583 | S00010811 | ETHIOPIA | MURSI | female | Y | sick | N |
| SA000581 | S00010795 | ETHIOPIA | MURSI | female | Y | sick | Y |
| SA000584 | S00010819 | ETHIOPIA | MURSI | male | N | sick | N |
| SA000580 | S00010787 | ETHIOPIA | MURSI | male | Y | sick | N |
| SA000582 | S00010803 | ETHIOPIA | MURSI | male | Y | sick | N |
| SA000590 | S00010867 | ETHIOPIA | SABUE | female | N | sick | N |
| SA000593 | S00010891 | ETHIOPIA | SABUE | female | Y | healthy | Y |
| SA000591 | S00010875 | ETHIOPIA | SABUE | male | Y | healthy | N |
| SA000594 | S00010899 | ETHIOPIA | SABUE | male | Y | healthy | Y |
| SA000592 | S00010883 | ETHIOPIA | SABUE | male | Y | not known | N |
| SA000570 | S00010707 | ETHIOPIA | WEYTO | female | Y | sick | N |
| SA000573 | S00010731 | ETHIOPIA | WEYTO | female | Y | sick | N |
| SA000572 | S00010723 | ETHIOPIA | WEYTO | male | Y | healthy | N |
| SA000571 | S00010715 | ETHIOPIA | WEYTO | male | Y | sick | N |
| SA000574 | S00010739 | ETHIOPIA | WEYTO | male | Y | sick | N |
| SA000597 | S00010923 | TANZANIA | HADZABE | female | N | sick | N |
| SA000595 | S00010907 | TANZANIA | HADZABE | female | Y | sick | Y |
| SA000598 | S00010931 | TANZANIA | HADZABE | male | N | sick | Y |
| SA000596 | S00010915 | TANZANIA | HADZABE | male | Y | sick | N |
| SA000599 | S00010939 | TANZANIA | HADZABE | male | Y | sick | Y |
| SA000602 | S00010963 | TANZANIA | MAASAI | female | N | not known | N |
| SA000604 | S00010979 | TANZANIA | MAASAI | female | N | sick | N |
| SA000603 | S00010971 | TANZANIA | MAASAI | female | Y | sick | N |
| SA000600 | S00010947 | TANZANIA | MAASAI | male | Y | sick | N |
| SA000601 | S00010955 | TANZANIA | MAASAI | male | Y | sick | N |
| SA000605 | S00010987 | TANZANIA | SANDAWE | female | N | sick | N |
| SA000607 | S00011003 | TANZANIA | SANDAWE | female | Y | sick | N |
| SA000609 | S00011019 | TANZANIA | SANDAWE | female | Y | sick | N |
| SA000606 | S00010995 | TANZANIA | SANDAWE | male | N | sick | N |
| SA000608 | S00011011 | TANZANIA | SANDAWE | male | N | sick | N |
| Showing results 1 to 40 of 40 |
Collection:
| Collection ID: | CO000011 |
| Collection Summary: | - |
Treatment:
| Treatment ID: | TR000019 |
Sample Preparation:
| Sampleprep ID: | SP000021 |
| Sampleprep Summary: | - |
Chromatography:
| Chromatography ID: | CH000011 |
Analysis:
| Analysis ID: | AN000027 |
| Analysis Type: | MS |
| Acquisition ID: | AQM003 |
| Instrument Name: | Agilent 1200 LC / 6530 QTOF MS |
| Detector Type: | LC/Electro-spray/QTOF MS Positive |
| Chromatography ID: | CH000011 |
| Num Factors: | 30 |
| Num Metabolites: | 127 |
| Units: | Peak area |
| Analysis ID: | AN000028 |
| Analysis Type: | MS |
| Acquisition ID: | AQM004 |
| Instrument Name: | Agilent 1200 LC / 6530 QTOF MS |
| Detector Type: | LC/Electro-spray/QTOF MS Negative |
| Chromatography ID: | CH000011 |
| Num Factors: | 30 |
| Num Metabolites: | 135 |
| Units: | Peak area |
