Summary of Study ST000162
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000135. The data can be accessed directly via it's Project DOI: 10.21228/M8D010 This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
| Study ID | ST000162 |
| Study Title | Yeast glycolysis in normoxia and hypoxia (150121_pkf2) |
| Study Type | Yeast glycolysis |
| Study Summary | Analyze yeast glycolysis |
| Institute | University of Michigan |
| Department | Biomedical Research Core Facilities |
| Laboratory | Metabolomics core |
| Last Name | Kachman |
| First Name | Maureen |
| Address | 6300 Brehm Tower, 1000 Wall Street, Ann Arbor, MI 48105-5714 |
| mkachman@umich.edu | |
| Submit Date | 2015-02-03 |
| Num Groups | 12 |
| Total Subjects | 12 |
| Raw Data Available | Yes |
| Raw Data File Type(s) | d |
| Uploaded File Size | 2.2 G |
| Analysis Type Detail | LC-MS |
| Release Date | 2015-04-28 |
| Release Version | 1 |
Select appropriate tab below to view additional metadata details:
Project:
| Project ID: | PR000135 |
| Project DOI: | doi: 10.21228/M8D010 |
| Project Title: | pfk2 |
| Project Summary: | Yeast glycolysis in normoxia and hypoxia |
| Institute: | University of Michigan |
| Department: | LSI & Human Genetics |
| Laboratory: | Kim Lab |
| Last Name: | Kim |
| First Name: | John |
| Address: | Ann Arbor, MI |
| Email: | jnkim@umich.edu |
| Phone: | 734-615-9915 |
Subject:
| Subject ID: | SU000181 |
| Subject Type: | Yeast cells |
| Subject Species: | Saccharomyces cerevisiae |
| Taxonomy ID: | 4932 |
| Species Group: | Microorganism |
Factors:
Subject type: Yeast cells; Subject species: Saccharomyces cerevisiae (Factor headings shown in green)
| mb_sample_id | local_sample_id | strain | O2 |
|---|---|---|---|
| SA008615 | S00017176 | aro1D | + |
| SA008617 | S00017182 | aro1D | + |
| SA008616 | S00017179 | aro1D | - |
| SA008618 | S00017185 | aro1D | - |
| SA008619 | S00017177 | atp1D | + |
| SA008621 | S00017183 | atp1D | + |
| SA008620 | S00017180 | atp1D | - |
| SA008622 | S00017186 | atp1D | - |
| SA008611 | S00017175 | WT | + |
| SA008612 | S00017178 | WT | - |
| SA008613 | S00017181 | WT | + |
| SA008614 | S00017184 | WT | - |
| Showing results 1 to 12 of 12 |
Collection:
| Collection ID: | CO000167 |
| Collection Summary: | - |
| Sample Type: | Saccharomyces cerevisiae |
Treatment:
| Treatment ID: | TR000187 |
Sample Preparation:
| Sampleprep ID: | SP000181 |
| Sampleprep Summary: | - |
| Sampleprep Protocol Filename: | Gly-TCA-nucleotides_analysis_protocol-2015-03-09.docx |
Combined analysis:
| Analysis ID | AN000254 |
|---|---|
| Analysis type | MS |
| Chromatography type | HILIC |
| Chromatography system | Agilent 1260 |
| Column | Phenomenex Luna NH2 (150 x 1mm,3um) |
| MS Type | ESI |
| MS instrument type | QTOF |
| MS instrument name | Agilent 6520 QTOF |
| Ion Mode | NEGATIVE |
| Units | mM |
Chromatography:
| Chromatography ID: | CH000179 |
| Methods ID: | AQM020 |
| Methods Filename: | QTOF-002-HILIC-35min-1mm.m.zip |
| Instrument Name: | Agilent 1260 |
| Column Name: | Phenomenex Luna NH2 (150 x 1mm,3um) |
| Chromatography Type: | HILIC |
MS:
| MS ID: | MS000204 |
| Analysis ID: | AN000254 |
| Instrument Name: | Agilent 6520 QTOF |
| Instrument Type: | QTOF |
| MS Type: | ESI |
| Ion Mode: | NEGATIVE |
| Acquisition Parameters File: | QTOF-002-HILIC-35min-1mm.m.zip |
| Processing Parameters File: | EX00391-Quant-method.m.zip |
