Summary of Study ST000169

This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000147. The data can be accessed directly via it's Project DOI: 10.21228/M8ZP40 This work is supported by NIH grant, U2C- DK119886.

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Study IDST000169
Study TitleBaby Mice Hyperoxia treatment (G64-N.H-7d14d)
Study SummaryIn this experiment 2 day old baby mice were exposed to hyperoxia (75% O2) continuously for 14 days. Control baby mice were housed in room air (normoxia). Plasma and bronchoalveolar lavage fluid (BALF) were harvested after 14 days of exposure (on Day of life 16)
Institute
University of Michigan
DepartmentBiomedical Research Core Facilities
LaboratoryMetabolomics core
Last NameKachman
First NameMaureen
Address6300 Brehm Tower, 1000 Wall Street, Ann Arbor, MI 48105-5714
Email mkachman@umich.edu
Submit Date2014-10-28
Num Groups1
Total Subjects16
Raw Data AvailableYes
Raw Data File Type(s)d
Uploaded File Size32 M
Analysis Type DetailLC-MS
Release Date2015-06-28
Release Version1
Maureen Kachman Maureen Kachman
https://dx.doi.org/10.21228/M8ZP40
ftp://www.metabolomicsworkbench.org/Studies/ application/zip

Select appropriate tab below to view additional metadata details:

Project:

Project ID:PR000147
Project DOI:doi: 10.21228/M8ZP40
Project Title:Early in life exposures studies
Project Summary:Early in life exposures affect innate immune cells activation
Institute:University of Michigan
Department:Pediatrics
Laboratory:Hershenson Lab
Last Name:Popova
First Name:Antonia
Address:Ann Arbor, MI
Email:antoniap@med.umich.edu
Phone:734-764-6736

Subject:

Subject ID:SU000188
Subject Type:Animal
Subject Species:Mus musculus
Taxonomy ID:10090
Species Group:Mammal

Factors:

Subject type: Animal; Subject species: Mus musculus (Factor headings shown in green)

mb_sample_id local_sample_id Type Condition
SA009340S00016724BALF Hyperoxia
SA009341S00016726BALF Hyperoxia
SA009342S00016725BALF Hyperoxia
SA009343S00016727BALF Hyperoxia
SA009344S00016721BALF Normoxia
SA009345S00016722BALF Normoxia
SA009346S00016723BALF Normoxia
SA009347S00016720BALF Normoxia
SA009348S00016719Plasma Hyperoxia
SA009349S00016717Plasma Hyperoxia
SA009350S00016716Plasma Hyperoxia
SA009351S00016718Plasma Hyperoxia
SA009352S00016713Plasma Normoxia
SA009353S00016714Plasma Normoxia
SA009354S00016715Plasma Normoxia
SA009355S00016712Plasma Normoxia
Showing results 1 to 16 of 16

Collection:

Collection ID:CO000175
Collection Summary:-
Sample Type:Blood plasma, Bronchoalveolar Lavage Fluid

Treatment:

Treatment ID:TR000195

Sample Preparation:

Sampleprep ID:SP000189
Sampleprep Summary:-
Sampleprep Protocol Filename:Gly-TCA-nucleotides_analysis_protocol-2015-03-09.docx

Combined analysis:

Analysis ID AN000263
Analysis type MS
Chromatography type HILIC
Chromatography system Agilent 1260
Column Phenomenex Luna NH2 (150 x 1mm,3um)
MS Type ESI
MS instrument type QTOF
MS instrument name Agilent 6520 QTOF
Ion Mode NEGATIVE
Units mM

Chromatography:

Chromatography ID:CH000186
Methods ID:AQM015
Methods Filename:QQQ-ATP,ADP,AMP,A-Insert.m.zip
Instrument Name:Agilent 1260
Column Name:Phenomenex Luna NH2 (150 x 1mm,3um)
Chromatography Type:HILIC

MS:

MS ID:MS000212
Analysis ID:AN000263
Instrument Name:Agilent 6520 QTOF
Instrument Type:QTOF
MS Type:ESI
Ion Mode:NEGATIVE
Acquisition Parameters File:QQQ-ATP,ADP,AMP,A-Insert.m.zip
Processing Parameters File:EX00371-Nucleotides-Quant.m.zip
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