Summary of Study ST000171
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000148. The data can be accessed directly via it's Project DOI: 10.21228/M8V011 This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
| Study ID | ST000171 |
| Study Title | cell metabolomics (metabolic phenotypes of a clock mutant mouse) |
| Institute | University of Michigan |
| Department | Biomedical Research Core Facilities |
| Laboratory | Metabolomics core |
| Last Name | Kachman |
| First Name | Maureen |
| Address | 6300 Brehm Tower, 1000 Wall Street, Ann Arbor, MI 48105-5714 |
| mkachman@umich.edu | |
| Submit Date | 2014-04-01 |
| Num Groups | 11 |
| Total Subjects | 11 |
| Raw Data Available | Yes |
| Raw Data File Type(s) | d |
| Uploaded File Size | 4.0 M |
| Analysis Type Detail | GC-MS |
| Release Date | 2015-06-28 |
| Release Version | 1 |
Select appropriate tab below to view additional metadata details:
Project:
| Project ID: | PR000148 |
| Project DOI: | doi: 10.21228/M8V011 |
| Project Title: | trcp |
| Project Summary: | metabolic phenotypes of a clock mutant mouse |
| Institute: | Florida State University |
| Department: | Biomedical Sciences |
| Laboratory: | Lee Lab |
| Last Name: | Lee |
| First Name: | Choogon |
| Address: | Tallahassee, FL |
| Email: | choogon.lee@med.fsu.edu |
| Phone: | 850-645-1478 |
Subject:
| Subject ID: | SU000190 |
| Subject Type: | Animal |
| Subject Species: | Mus musculus |
| Taxonomy ID: | 10090 |
| Species Group: | Mammal |
Factors:
Subject type: Animal; Subject species: Mus musculus (Factor headings shown in green)
| mb_sample_id | local_sample_id | Type |
|---|---|---|
| SA009365 | S00013516 | control |
| SA009366 | S00013518 | control cell1 |
| SA009367 | S00013519 | control cell2 |
| SA009368 | S00013520 | control cell3 |
| SA009369 | S00013521 | control cell4 |
| SA009370 | S00013517 | ko |
| SA009371 | S00013522 | ko cell1 |
| SA009372 | S00013523 | ko cell2 |
| SA009373 | S00013524 | ko cell3 |
| SA009374 | S00013525 | ko cell4 |
| SA009375 | S00013515 | starting medium |
| Showing results 1 to 11 of 11 |
Collection:
| Collection ID: | CO000177 |
| Collection Summary: | - |
| Sample Type: | Fibroblasts |
Treatment:
| Treatment ID: | TR000197 |
Sample Preparation:
| Sampleprep ID: | SP000191 |
| Sampleprep Summary: | - |
| Sampleprep Protocol Filename: | Gly-TCA-nucleotides_analysis_protocol-2015-03-09.docx |
Combined analysis:
| Analysis ID | AN000265 |
|---|---|
| Analysis type | MS |
| Chromatography type | GC |
| Chromatography system | |
| Column | Agilent DB5-MS (30m × 0.25mm, 0.25um) |
| MS Type | EI |
| MS instrument type | Single quadrupole |
| MS instrument name | Agilent 5975C |
| Ion Mode | POSITIVE |
| Units | µM |
Chromatography:
| Chromatography ID: | CH000188 |
| Methods ID: | AQM011 |
| Methods Filename: | ALPHA_KETO_ACIDS-FULL.M.zip |
| Column Name: | Agilent DB5-MS (30m × 0.25mm, 0.25um) |
| Chromatography Type: | GC |
MS:
| MS ID: | MS000214 |
| Analysis ID: | AN000265 |
| Instrument Name: | Agilent 5975C |
| Instrument Type: | Single quadrupole |
| MS Type: | EI |
| Ion Mode: | POSITIVE |
| Acquisition Parameters File: | ALPHA_KETO_ACIDS-FULL.M.zip |
| Processing Parameters File: | EX00266-MassHunterQuant-GlyTCA-GCMS-DataAnalysis-Method.m.zip |
