Summary of Study ST000245

This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000198. The data can be accessed directly via it's Project DOI: 10.21228/M8SW2R This work is supported by NIH grant, U2C- DK119886.

See: https://www.metabolomicsworkbench.org/about/howtocite.php

Perform statistical analysis  |  Show all samples  |  Show named metabolites  |  Download named metabolite data  
Download mwTab file (text)   |  Download mwTab file(JSON)   |  Download data files (Contains raw data)
Study IDST000245
Study TitleAcyl-Carnitine Analysis in mouse soleus muscle
Study SummaryComparison of Short Chain Acyl-carnitines in treated diabetic, untreated diabetic, and control mouse soleus muscle
Institute
University of Michigan
DepartmentBiomedical Research Core Facilities
LaboratoryMetabolomics core
Last NameKachman
First NameMaureen
Address6300 Brehm Tower, 1000 Wall Street, Ann Arbor, MI 48105-5714
Email mkachman@umich.edu
Submit Date2014-07-01
Num Groups3
Total Subjects19
Raw Data AvailableYes
Raw Data File Type(s)d
Analysis Type DetailLC-MS
Release Date2016-06-18
Release Version1
Maureen Kachman Maureen Kachman
https://dx.doi.org/10.21228/M8SW2R
ftp://www.metabolomicsworkbench.org/Studies/ application/zip

Select appropriate tab below to view additional metadata details:


Project:

Project ID:PR000198
Project DOI:doi: 10.21228/M8SW2R
Project Title:Metabolism of muscle proteins in type I diabetic mice
Project Summary:Comparison of Short Chain Acyl-carnitines in treated diabetic, untreated diabetic, and control mouse soleus muscle
Institute:Mayo Clinic
Department:Endocrine Research
Laboratory:Nair Lab
Last Name:Nair
First Name:Sreekumaran
Address:Rochester, MN
Email:nair.sree@mayo.edu
Phone:507-255-2969

Subject:

Subject ID:SU000265
Subject Type:Animal
Subject Species:Mus musculus
Taxonomy ID:10090
Species Group:Mammal

Factors:

Subject type: Animal; Subject species: Mus musculus (Factor headings shown in green)

mb_sample_id local_sample_id status
SA011321S00015069control
SA011322S00015072control
SA011323S00015067control
SA011324S00015068control
SA011325S00015070control
SA011326S00015073control
SA011327S00015071control
SA011316S00015075Treated diabetic
SA011317S00015077Treated diabetic
SA011318S00015078Treated diabetic
SA011319S00015074Treated diabetic
SA011320S00015076Treated diabetic
SA011328S00015084untreated diabetic
SA011329S00015085untreated diabetic
SA011330S00015083untreated diabetic
SA011331S00015080untreated diabetic
SA011332S00015079untreated diabetic
SA011333S00015081untreated diabetic
SA011334S00015082untreated diabetic
Showing results 1 to 19 of 19

Collection:

Collection ID:CO000256
Sample Type:Muscles

Treatment:

Treatment ID:TR000276

Sample Preparation:

Sampleprep ID:SP000270
Sampleprep Protocol Filename:Acyl-carnitines_analysis_protocol-CR-MK-20150528.docx

Combined analysis:

Analysis ID AN000383
Analysis type MS
Chromatography type Reversed phase
Chromatography system Agilent 1200
Column Waters Acquity HSS T3 (50 x 2.1mm, 1.8um)
MS Type ESI
MS instrument type Triple quadrupole
MS instrument name Agilent 6490 QQQ
Ion Mode POSITIVE
Units pmol/mg tissue

Chromatography:

Chromatography ID:CH000275
Methods ID:AQM050
Methods Filename:QM-004-Xbridg2mm_ACar+_MRM-Insert.m.zip
Instrument Name:Agilent 1200
Column Name:Waters Acquity HSS T3 (50 x 2.1mm, 1.8um)
Chromatography Type:Reversed phase

MS:

MS ID:MS000329
Analysis ID:AN000383
Instrument Name:Agilent 6490 QQQ
Instrument Type:Triple quadrupole
MS Type:ESI
Ion Mode:POSITIVE
Acquisition Parameters File:QM-004-Xbridg2mm_ACar+_MRM-Insert.m.zip
Processing Parameters File:EX00315-acyl-carnitines-quant.m.zip
  logo