Summary of Study ST000296
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000237. The data can be accessed directly via it's Project DOI: 10.21228/M81608 This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
| Study ID | ST000296 |
| Study Title | Chronic mild stress and Lactobacillus experiments on mice |
| Study Summary | Mice were devided into three groups (Naive untreated, Stressed untreated, Stressed + Lacto). The stressed groups were subjected to unpredictable chronic mild stress for seven weeks. Three weeks into the protocol, the +Lacto groups were administered probiotic Lactobacillus daily. |
| Institute | University of Michigan |
| Department | Biomedical Research Core Facilities |
| Laboratory | Metabolomics core |
| Last Name | Kachman |
| First Name | Maureen |
| Address | 6300 Brehm Tower, 1000 Wall Street, Ann Arbor, MI 48105-5714 |
| mkachman@med.umich.edu | |
| Phone | (734) 232-8175 |
| Submit Date | 2014-10-28 |
| Num Groups | 4 |
| Total Subjects | 16 |
| Raw Data Available | Yes |
| Raw Data File Type(s) | d |
| Analysis Type Detail | GC-MS |
| Release Date | 2016-06-18 |
| Release Version | 1 |
Select appropriate tab below to view additional metadata details:
Project:
| Project ID: | PR000237 |
| Project DOI: | doi: 10.21228/M81608 |
| Project Title: | Brain-Immune-Gut Interaction Studies |
| Project Summary: | Brain-Immune-Gut Interaction in Chronic Mild Stress |
| Institute: | University of Virginia |
| Department: | Neuroscience |
| Laboratory: | Kipnis Lab |
| Last Name: | Kipnis |
| First Name: | Jonathan |
| Address: | Charlottesville, VA |
| Email: | kipnis@virginia.edu |
| Phone: | 434-982-3858 |
Subject:
| Subject ID: | SU000316 |
| Subject Type: | Animal |
| Subject Species: | Mus musculus |
| Taxonomy ID: | 10090 |
| Species Group: | Mammals |
Factors:
Subject type: Animal; Subject species: Mus musculus (Factor headings shown in green)
| mb_sample_id | local_sample_id | Lactobacillus | Stress |
|---|---|---|---|
| SA013465 | S00016742 | N | N |
| SA013466 | S00016738 | N | N |
| SA013467 | S00016741 | N | N |
| SA013468 | S00016740 | N | N |
| SA013469 | S00016739 | N | N |
| SA013470 | S00016747 | N | Y |
| SA013471 | S00016746 | N | Y |
| SA013472 | S00016745 | N | Y |
| SA013473 | S00016743 | N | Y |
| SA013474 | S00016744 | N | Y |
| SA013475 | S00017167 | POOLED | POOLED |
| SA013476 | S00016752 | Y | Y |
| SA013477 | S00016750 | Y | Y |
| SA013478 | S00016748 | Y | Y |
| SA013479 | S00016749 | Y | Y |
| SA013480 | S00016751 | Y | Y |
| Showing results 1 to 16 of 16 |
Collection:
| Collection ID: | CO000310 |
| Collection Summary: | - |
| Sample Type: | Serum |
Treatment:
| Treatment ID: | TR000330 |
| Treatment Summary: | - |
Sample Preparation:
| Sampleprep ID: | SP000324 |
| Sampleprep Summary: | - |
| Sampleprep Protocol Filename: | ShortChainFattyAcids-20150305.docx |
Combined analysis:
| Analysis ID | AN000474 |
|---|---|
| Analysis type | MS |
| Chromatography type | GC |
| Chromatography system | Agilent 7890A |
| Column | Phenomenex Zebron ZB-WAXplus (30m x 0.25mm,0.25um) |
| MS Type | EI |
| MS instrument type | Single quadrupole |
| MS instrument name | Agilent 5975C |
| Ion Mode | POSITIVE |
| Units | uM |
Chromatography:
| Chromatography ID: | CH000337 |
| Methods Filename: | WAXPLUS_100-200C_2_SIM.txt |
| Instrument Name: | Agilent 7890A |
| Column Name: | Phenomenex Zebron ZB-WAXplus (30m x 0.25mm,0.25um) |
| Chromatography Type: | GC |
MS:
| MS ID: | MS000414 |
| Analysis ID: | AN000474 |
| Instrument Name: | Agilent 5975C |
| Instrument Type: | Single quadrupole |
| MS Type: | EI |
| MS Comments: | GCMS method |
| Ion Mode: | POSITIVE |
| Analysis Protocol File: | ShortChainFattyAcids-20150305.docx |
