Summary of Study ST000562
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000413. The data can be accessed directly via it's Project DOI: 10.21228/M8P31H This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
| Study ID | ST000562 |
| Study Title | Brown vs White adipose tissue |
| Study Summary | Measure ceramide levels in brown and white adipose tissues of mice |
| Institute | University of Michigan |
| Department | Biomedical Research Core Facilities |
| Laboratory | Metabolomics core |
| Last Name | Kachman |
| First Name | Maureen |
| Address | 6300 Brehm Tower, 1000 Wall Street, Ann Arbor, MI 48105-5714 |
| mkachman@med.umich.edu | |
| Phone | 734-232-8175 |
| Submit Date | 2015-12-11 |
| Num Groups | 4 |
| Total Subjects | 20 |
| Raw Data Available | Yes |
| Raw Data File Type(s) | d |
| Analysis Type Detail | LC-MS |
| Release Date | 2017-07-10 |
| Release Version | 1 |
Select appropriate tab below to view additional metadata details:
Project:
| Project ID: | PR000413 |
| Project DOI: | doi: 10.21228/M8P31H |
| Project Title: | Ceramide assay |
| Project Summary: | Ceramide metabolism in mouse adipose tissue |
| Institute: | University of Michigan |
| Department: | Internal Medicine |
| Last Name: | Chen |
| First Name: | Yuqing Eugene |
| Address: | Ann Arbor, MI 48105-5714 |
| Email: | echenum@umich.edu |
| Phone: | 734-936-9548 |
Subject:
| Subject ID: | SU000584 |
| Subject Type: | Animal |
| Subject Species: | Mus musculus |
| Taxonomy ID: | 10090 |
| Species Group: | Mammal |
Factors:
Subject type: Animal; Subject species: Mus musculus (Factor headings shown in green)
| mb_sample_id | local_sample_id | Adipose tissue | Treatment |
|---|---|---|---|
| SA029027 | S00016643 | Brown | N |
| SA029028 | S00016647 | Brown | N |
| SA029029 | S00016646 | Brown | N |
| SA029030 | S00016644 | Brown | N |
| SA029031 | S00016645 | Brown | N |
| SA029032 | S00016652 | Brown | Y |
| SA029033 | S00016651 | Brown | Y |
| SA029034 | S00016649 | Brown | Y |
| SA029035 | S00016648 | Brown | Y |
| SA029036 | S00016650 | Brown | Y |
| SA029037 | S00016657 | White | N |
| SA029038 | S00016656 | White | N |
| SA029039 | S00016653 | White | N |
| SA029040 | S00016655 | White | N |
| SA029041 | S00016654 | White | N |
| SA029042 | S00016661 | White | Y |
| SA029043 | S00016662 | White | Y |
| SA029044 | S00016660 | White | Y |
| SA029045 | S00016658 | White | Y |
| SA029046 | S00016659 | White | Y |
| Showing results 1 to 20 of 20 |
Collection:
| Collection ID: | CO000578 |
| Collection Summary: | None |
| Sample Type: | Adipose Tissue |
Treatment:
| Treatment ID: | TR000598 |
| Treatment Summary: | None |
Sample Preparation:
| Sampleprep ID: | SP000591 |
| Sampleprep Summary: | None |
| Sampleprep Protocol Filename: | Ceramides-20150305.docx |
Combined analysis:
| Analysis ID | AN000864 |
|---|---|
| Analysis type | MS |
| Chromatography type | Reversed phase |
| Chromatography system | None |
| Column | Waters XBridge C18 (50 x 2.1mm,3um) |
| MS Type | ESI |
| MS instrument type | Triple quadrupole |
| MS instrument name | Agilent 6410A QQQ |
| Ion Mode | POSITIVE |
| Units | pg/mg tissue |
Chromatography:
| Chromatography ID: | CH000614 |
| Methods ID: | DQM0152 |
| Methods Filename: | QM033_2mmC18_Ceramide_MRM.m.zip |
| Instrument Name: | None |
| Column Name: | Waters XBridge C18 (50 x 2.1mm,3um) |
| Chromatography Type: | Reversed phase |
MS:
| MS ID: | MS000765 |
| Analysis ID: | AN000864 |
| Instrument Name: | Agilent 6410A QQQ |
| Instrument Type: | Triple quadrupole |
| MS Type: | ESI |
| Ion Mode: | POSITIVE |
