Summary of Study ST000718
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000515. The data can be accessed directly via it's Project DOI: 10.21228/M83D4G This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.
Study ID | ST000718 |
Study Title | Targeted Metabolomics in Pediatric US Population Exposed to Low-Level Heavy Metals |
Study Type | MS analysis |
Study Summary | targeted assays for 200 SLS kids. TCA-Plus and D4 Steroids (Corticosterone, Cortisol, Cortisone, 11-deoxycortisol, 11-deoxycorticostersone, 18-Hydroxycortisol, 21-Deoxycortisol) |
Institute | University of Michigan |
Department | Biomedical Research Core Facilities |
Laboratory | Metabolomics core |
Last Name | Kachman |
First Name | Maureen |
Address | 6300 Brehm Tower, 1000 Wall Street, Ann Arbor, MI 48105-5714 |
mkachman@med.umich.edu | |
Phone | (734) 232-8175 |
Submit Date | 2017-06-19 |
Num Groups | 4 |
Total Subjects | 200 |
Raw Data Available | Yes |
Raw Data File Type(s) | d |
Analysis Type Detail | GC-MS/LC-MS |
Release Date | 2018-02-07 |
Release Version | 1 |
Select appropriate tab below to view additional metadata details:
Project:
Project ID: | PR000515 |
Project DOI: | doi: 10.21228/M83D4G |
Project Title: | Syracuse Lead Study (SRS) |
Project Type: | MS analysis |
Project Summary: | Environmental Toxicants, Race, and Cardiovascular Disease Risk in Children |
Institute: | State University of New York |
Department: | Chemistry |
Laboratory: | Bendinskas Lab |
Last Name: | Bendinskas |
First Name: | Kestutis |
Address: | Oswego, New York |
Email: | kestutis.bendinskas@oswego.edu |
Phone: | 315-312-2696 |
Subject:
Subject ID: | SU000741 |
Subject Type: | Human |
Subject Species: | Homo sapiens |
Taxonomy ID: | 9606 |
Species Group: | Mammals |
Factors:
Subject type: Human; Subject species: Homo sapiens (Factor headings shown in green)
mb_sample_id | local_sample_id | Race | Sex |
---|---|---|---|
SA040165 | S00023832 | African | Female |
SA040166 | S00023829 | African | Female |
SA040167 | S00023888 | African | Female |
SA040168 | S00023974 | African | Female |
SA040169 | S00023947 | African | Female |
SA040170 | S00023978 | African | Female |
SA040171 | S00023837 | African | Female |
SA040172 | S00023865 | African | Female |
SA040173 | S00023823 | African | Female |
SA040174 | S00023930 | African | Female |
SA040175 | S00023980 | African | Female |
SA040176 | S00023931 | African | Female |
SA040177 | S00023932 | African | Female |
SA040178 | S00023881 | African | Female |
SA040179 | S00023879 | African | Female |
SA040180 | S00023950 | African | Female |
SA040181 | S00023857 | African | Female |
SA040182 | S00023954 | African | Female |
SA040183 | S00023862 | African | Female |
SA040184 | S00023956 | African | Female |
SA040185 | S00023871 | African | Female |
SA040186 | S00023961 | African | Female |
SA040187 | S00023964 | African | Female |
SA040188 | S00023878 | African | Female |
SA040189 | S00023949 | African | Female |
SA040190 | S00023962 | African | Female |
SA040191 | S00023873 | African | Female |
SA040192 | S00023821 | African | Female |
SA040193 | S00023934 | African | Female |
SA040194 | S00023915 | African | Female |
SA040195 | S00023985 | African | Female |
SA040196 | S00023810 | African | Female |
SA040197 | S00023795 | African | Female |
SA040198 | S00023808 | African | Female |
SA040199 | S00023989 | African | Female |
SA040200 | S00023987 | African | Female |
SA040201 | S00023988 | African | Female |
SA040202 | S00023800 | African | Female |
SA040203 | S00023811 | African | Female |
SA040204 | S00023917 | African | Female |
SA040205 | S00023927 | African | Female |
SA040206 | S00023816 | African | Female |
SA040207 | S00023918 | African | Female |
SA040208 | S00023981 | African | Female |
SA040209 | S00023906 | African | Female |
SA040210 | S00023814 | African | Female |
SA040211 | S00023990 | African | Female |
SA040212 | S00023907 | African | Female |
SA040213 | S00023913 | African | Male |
SA040214 | S00023955 | African | Male |
SA040215 | S00023867 | African | Male |
SA040216 | S00023874 | African | Male |
SA040217 | S00023912 | African | Male |
SA040218 | S00023872 | African | Male |
SA040219 | S00023916 | African | Male |
SA040220 | S00023870 | African | Male |
SA040221 | S00023883 | African | Male |
SA040222 | S00023943 | African | Male |
SA040223 | S00023889 | African | Male |
SA040224 | S00023887 | African | Male |
SA040225 | S00023895 | African | Male |
SA040226 | S00023936 | African | Male |
SA040227 | S00023928 | African | Male |
SA040228 | S00023903 | African | Male |
SA040229 | S00023944 | African | Male |
SA040230 | S00023946 | African | Male |
SA040231 | S00023880 | African | Male |
SA040232 | S00023910 | African | Male |
SA040233 | S00023924 | African | Male |
SA040234 | S00023925 | African | Male |
SA040235 | S00023884 | African | Male |
SA040236 | S00023929 | African | Male |
SA040237 | S00023877 | African | Male |
SA040238 | S00023960 | African | Male |
SA040239 | S00023864 | African | Male |
SA040240 | S00023805 | African | Male |
SA040241 | S00023831 | African | Male |
SA040242 | S00023830 | African | Male |
SA040243 | S00023803 | African | Male |
SA040244 | S00023977 | African | Male |
SA040245 | S00023836 | African | Male |
SA040246 | S00023835 | African | Male |
SA040247 | S00023834 | African | Male |
SA040248 | S00023806 | African | Male |
SA040249 | S00023826 | African | Male |
SA040250 | S00023815 | African | Male |
SA040251 | S00023986 | African | Male |
SA040252 | S00023984 | African | Male |
SA040253 | S00023817 | African | Male |
SA040254 | S00023818 | African | Male |
SA040255 | S00023825 | African | Male |
SA040256 | S00023822 | African | Male |
SA040257 | S00023820 | African | Male |
SA040258 | S00023812 | African | Male |
SA040259 | S00023838 | African | Male |
SA040260 | S00023853 | African | Male |
SA040261 | S00023852 | African | Male |
SA040262 | S00023963 | African | Male |
SA040263 | S00023920 | African | Male |
SA040264 | S00023959 | African | Male |
Collection:
Collection ID: | CO000735 |
Collection Summary: | - |
Sample Type: | Cultured cells |
Treatment:
Treatment ID: | TR000755 |
Treatment Summary: | - |
Sample Preparation:
Sampleprep ID: | SP000748 |
Sampleprep Summary: | - |
Sampleprep Protocol Filename: | A005 - Amino Acids.pdf |
Combined analysis:
Analysis ID | AN001122 | AN001123 | AN001124 |
---|---|---|---|
Analysis type | MS | MS | MS |
Chromatography type | GC | HILIC | HILIC |
Chromatography system | Agilent 7890N | Agilent | Agilent |
Column | Phenomenex Zebron ZB-AAA Amino Acid Analysis 10m x 0.25mm | Phenomenex Luna NH2 (150 x 1mm,3um) | Phenomenex Luna NH2 (150 x 1mm,3um) |
MS Type | EI | ESI | ESI |
MS instrument type | Single quadrupole | QTOF | Triple quadrupole |
MS instrument name | Agilent 5975 | Agilent 6520B QTOF | Agilent 6490A QQQ |
Ion Mode | POSITIVE | NEGATIVE | NEGATIVE |
Units | uM | counts | pg/ml |
Chromatography:
Chromatography ID: | CH000788 |
Instrument Name: | Agilent 7890N |
Column Name: | Phenomenex Zebron ZB-AAA Amino Acid Analysis 10m x 0.25mm |
Chromatography Type: | GC |
Chromatography ID: | CH000789 |
Instrument Name: | Agilent |
Column Name: | Phenomenex Luna NH2 (150 x 1mm,3um) |
Flow Rate: | 0.075 mL/min |
Solvent A: | 100% water; 5 mM ammonium acetate, pH 9.9 |
Solvent B: | 100% acetonitrile |
Chromatography Type: | HILIC |
Chromatography ID: | CH000790 |
Instrument Name: | Agilent |
Column Name: | Phenomenex Luna NH2 (150 x 1mm,3um) |
Chromatography Type: | HILIC |
MS:
MS ID: | MS001017 |
Analysis ID: | AN001122 |
Instrument Name: | Agilent 5975 |
Instrument Type: | Single quadrupole |
MS Type: | EI |
Ion Mode: | POSITIVE |
Analysis Protocol File: | A005_Amino_Acids.pdf |
MS ID: | MS001018 |
Analysis ID: | AN001123 |
Instrument Name: | Agilent 6520B QTOF |
Instrument Type: | QTOF |
MS Type: | ESI |
Ion Mode: | NEGATIVE |
Analysis Protocol File: | A011_-_Glycolysis-TCA-nucleotides.pdf |
MS ID: | MS001019 |
Analysis ID: | AN001124 |
Instrument Name: | Agilent 6490A QQQ |
Instrument Type: | Triple quadrupole |
MS Type: | ESI |
Ion Mode: | NEGATIVE |
Analysis Protocol File: | Steroids-D5 analysis.pdf |