Summary of Study ST000725
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000522. The data can be accessed directly via it's Project DOI: 10.21228/M8667G This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.
| Study ID | ST000725 |
| Study Title | Metabolome, body composition, and muscle performance in children |
| Study Type | MS analysis |
| Study Summary | The purpose of this study is to determine potential relationships between plasma metabolome patterns and body composition in addition to muscle quality and muscular performance in children. Children ages 8 to 10 will complete body composition testing including BMI and skin fold measurements. An ultrasound machine will be used to determine cross-sectional area and echo intensity in the vastus lateralis and rectus femoris muscles as a measure of muscle quality. Isokinetic leg extension strength, power, and fatigability will be determined from a series of maximal knee extensions using an isokinetic dynamometer. An untargeted metabolomics test will be used on a single plasma sample from each subject in order to examine plasma metabolome |
| Institute | University of Michigan |
| Department | Biomedical Research Core Facilities |
| Laboratory | Metabolomics core |
| Last Name | Kachman |
| First Name | Maureen |
| Address | 6300 Brehm Tower, 1000 Wall Street, Ann Arbor, MI 48105-5714 |
| mkachman@med.umich.edu | |
| Phone | (734) 232-8175 |
| Submit Date | 2017-06-19 |
| Num Groups | 12 |
| Total Subjects | 11 |
| Raw Data Available | Yes |
| Raw Data File Type(s) | d |
| Analysis Type Detail | LC-MS |
| Release Date | 2017-12-06 |
| Release Version | 1 |
Select appropriate tab below to view additional metadata details:
Project:
| Project ID: | PR000522 |
| Project DOI: | doi: 10.21228/M8667G |
| Project Title: | Metabolome, body composition, and muscle performance in children |
| Project Type: | MS analysis |
| Project Summary: | Examining potential relationships between metabolome, body composition, and muscle performance in children |
| Institute: | University of Kansas |
| Department: | Health, Sport, and Exercise Sciences |
| Laboratory: | Herda Lab |
| Last Name: | Herda |
| First Name: | Trent |
| Address: | Lawrence, KS |
| Email: | t.herda@ku.edu |
| Phone: | 785-864-2224 |
Subject:
| Subject ID: | SU000748 |
| Subject Type: | Human |
| Subject Species: | Homo sapiens |
| Taxonomy ID: | 9606 |
| Species Group: | Human |
Factors:
Subject type: Human; Subject species: Homo sapiens (Factor headings shown in green)
| mb_sample_id | local_sample_id | gender |
|---|---|---|
| SA040721 | S00027746 | Female |
| SA040722 | S00027749 | Female |
| SA040723 | S00027744 | Female |
| SA040724 | S00027745 | Female |
| SA040725 | S00027750 | Male |
| SA040726 | S00027741 | Male |
| SA040727 | S00027742 | Male |
| SA040728 | S00027748 | Male |
| SA040729 | S00027743 | Male |
| SA040730 | S00027747 | Male |
| SA040731 | S00027740 | Male |
| Showing results 1 to 11 of 11 |
Collection:
| Collection ID: | CO000742 |
| Collection Summary: | - |
| Sample Type: | Blood |
Treatment:
| Treatment ID: | TR000762 |
| Treatment Summary: | - |
Sample Preparation:
| Sampleprep ID: | SP000755 |
| Sampleprep Summary: | - |
| Sampleprep Protocol Filename: | A003_-_Untargeted_Metabolomics.pdf |
Combined analysis:
| Analysis ID | AN001136 | AN001137 |
|---|---|---|
| Analysis type | MS | MS |
| Chromatography type | Reversed phase | Reversed phase |
| Chromatography system | Agilent | Agilent |
| Column | Waters Acquity HSS T3 (50 x 2.1mm,1.8um) | Waters Acquity HSS T3 (50 x 2.1mm,1.8um) |
| MS Type | ESI | ESI |
| MS instrument type | QTOF | QTOF |
| MS instrument name | Agilent 6530 QTOF | Agilent 6530 QTOF |
| Ion Mode | NEGATIVE | POSITIVE |
| Units | peak area | peak area |
Chromatography:
| Chromatography ID: | CH000798 |
| Instrument Name: | Agilent |
| Column Name: | Waters Acquity HSS T3 (50 x 2.1mm,1.8um) |
| Chromatography Type: | Reversed phase |
MS:
| MS ID: | MS001031 |
| Analysis ID: | AN001136 |
| Instrument Name: | Agilent 6530 QTOF |
| Instrument Type: | QTOF |
| MS Type: | ESI |
| Ion Mode: | NEGATIVE |
| Analysis Protocol File: | A003_-_Untargeted_Metabolomics.pdf |
| MS ID: | MS001032 |
| Analysis ID: | AN001137 |
| Instrument Name: | Agilent 6530 QTOF |
| Instrument Type: | QTOF |
| MS Type: | ESI |
| Ion Mode: | POSITIVE |
| Analysis Protocol File: | A003_-_Untargeted_Metabolomics.pdf |
