Summary of Study ST000733
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000530. The data can be accessed directly via it's Project DOI: 10.21228/M8566S This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
| Study ID | ST000733 |
| Study Title | Microbial changes following fecal microbiota transplantation in patients with recurrent C. difficile infection |
| Study Type | MS analysis |
| Study Summary | Fecal samples were collected from patients with recurrent Clostridium difficile infection before and after treatment with fecal microbiota transplantation. Fecal samples were frozen immediately after collections, and later put into ~50mg aliquots for later analysis (at -80 C). |
| Institute | University of Michigan |
| Department | Biomedical Research Core Facilities |
| Laboratory | Metabolomics core |
| Last Name | Kachman |
| First Name | Maureen |
| Address | 6300 Brehm Tower, 1000 Wall Street, Ann Arbor, MI 48105-5714 |
| mkachman@med.umich.edu | |
| Phone | (734) 232-8175 |
| Submit Date | 2017-06-19 |
| Num Groups | 21 |
| Total Subjects | 11 |
| Raw Data Available | Yes |
| Raw Data File Type(s) | d |
| Analysis Type Detail | GC-MS |
| Release Date | 2017-12-06 |
| Release Version | 1 |
Select appropriate tab below to view additional metadata details:
Project:
| Project ID: | PR000530 |
| Project DOI: | doi: 10.21228/M8566S |
| Project Title: | Microbial changes following fecal microbiota transplantation (FMT) in patients with Clostridium difficile |
| Project Type: | MS analysis |
| Project Summary: | Microbial changes following fecal microbiota transplantation in patients with recurrent Clostridium difficile infection |
| Institute: | University of Michigan |
| Department: | Internal Medicine |
| Laboratory: | Young Lab |
| Last Name: | Young |
| First Name: | Vincent |
| Address: | Ann Arbor, MI |
| Email: | youngvi@med.umich.edu |
| Phone: | 734-764-2237 |
Subject:
| Subject ID: | SU000756 |
| Subject Type: | Human |
| Subject Species: | Homo sapiens |
| Taxonomy ID: | 9606 |
| Species Group: | Mammals |
Factors:
Subject type: Human; Subject species: Homo sapiens (Factor headings shown in green)
| mb_sample_id | local_sample_id | patient type | sample type |
|---|---|---|---|
| SA040950 | S00022763 | donor | donor |
| SA040951 | S00022757 | donor | donor |
| SA040952 | S00022771 | donor | donor |
| SA040953 | S00022778 | donor | donor |
| SA040954 | S00022779 | donor | donor |
| SA040955 | S00022756 | donor | donor |
| SA040956 | S00022772 | donor | donor |
| SA040957 | S00022764 | donor | donor |
| SA040958 | S00022749 | donor | donor |
| SA040959 | S00022748 | donor | donor |
| SA040960 | S00022774 | recipient | post |
| SA040961 | S00022775 | recipient | post |
| SA040962 | S00022746 | recipient | post |
| SA040963 | S00022770 | recipient | post |
| SA040964 | S00022747 | recipient | post |
| SA040965 | S00022776 | recipient | post |
| SA040966 | S00022745 | recipient | post |
| SA040967 | S00022784 | recipient | post |
| SA040968 | S00022785 | recipient | post |
| SA040969 | S00022783 | recipient | post |
| SA040970 | S00022782 | recipient | post |
| SA040971 | S00022769 | recipient | post |
| SA040972 | S00022744 | recipient | post |
| SA040973 | S00022777 | recipient | post |
| SA040974 | S00022768 | recipient | post |
| SA040975 | S00022761 | recipient | post |
| SA040976 | S00022760 | recipient | post |
| SA040977 | S00022755 | recipient | post |
| SA040978 | S00022762 | recipient | post |
| SA040979 | S00022754 | recipient | post |
| SA040980 | S00022767 | recipient | post |
| SA040981 | S00022752 | recipient | post |
| SA040982 | S00022753 | recipient | post |
| SA040983 | S00022781 | recipient | pre |
| SA040984 | S00022743 | recipient | pre |
| SA040985 | S00022780 | recipient | pre |
| SA040986 | S00022759 | recipient | pre |
| SA040987 | S00022765 | recipient | pre |
| SA040988 | S00022766 | recipient | pre |
| SA040989 | S00022742 | recipient | pre |
| SA040990 | S00022773 | recipient | pre |
| SA040991 | S00022758 | recipient | pre |
| SA040992 | S00022751 | recipient | pre |
| SA040993 | S00022750 | recipient | pre |
| Showing results 1 to 44 of 44 |
Collection:
| Collection ID: | CO000750 |
| Collection Summary: | - |
| Sample Type: | Feces |
Treatment:
| Treatment ID: | TR000770 |
| Treatment Summary: | - |
Sample Preparation:
| Sampleprep ID: | SP000763 |
| Sampleprep Summary: | - |
| Sampleprep Protocol Filename: | A007_-_Short_Chain_Fatty_Acids.pdf |
Chromatography:
| Chromatography ID: | CH000807 |
| Instrument Name: | Agilent 7890N |
| Column Name: | Phenomenex Zebron ZB-WAXplus (30m x 0.25mm,0.25um) |
| Chromatography Type: | GC |
Analysis:
| Analysis ID: | AN001147 |
| Analysis Type: | MS |
| Analysis Protocol File: | A007_-_Short_Chain_Fatty_Acids.pdf |
| Instrument Name: | GC_7890N MS_5975 (Agilent) |
| Chromatography ID: | CH000807 |
| Num Factors: | 3 |
| Num Metabolites: | 8 |
| Units: | nmol/mg |
