Summary of Study ST000740
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000534. The data can be accessed directly via it's Project DOI: 10.21228/M8N67H This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
| Study ID | ST000740 |
| Study Title | Quantitating the baseline fatty acid composition in phospholipids in subgroups of tumor cells |
| Study Type | MS analysis |
| Study Summary | Determine the capacity of control and experimental cells to convert stearate to oleate. Determine free 13C stearate/oleate or that in PC, PE and PI. |
| Institute | University of Michigan |
| Department | Biomedical Research Core Facilities |
| Laboratory | Metabolomics core |
| Last Name | Kachman |
| First Name | Maureen |
| Address | 6300 Brehm Tower, 1000 Wall Street, Ann Arbor, MI 48105-5714 |
| mkachman@med.umich.edu | |
| Phone | (734) 232-8175 |
| Submit Date | 2017-06-19 |
| Num Groups | 8 |
| Total Subjects | 10 |
| Raw Data Available | Yes |
| Raw Data File Type(s) | d |
| Analysis Type Detail | GC-MS |
| Release Date | 2017-12-06 |
| Release Version | 1 |
Select appropriate tab below to view additional metadata details:
Project:
| Project ID: | PR000534 |
| Project DOI: | doi: 10.21228/M8N67H |
| Project Title: | Quantitating the baseline FA composition in phospholipids in subgroups of tumor cells |
| Project Type: | MS analysis |
| Project Summary: | Quantitating the baseline FA composition in phospholipids in subgroups of tumor cells |
| Institute: | Cincinnati Children's Hospital Medical Center |
| Department: | Oncology |
| Laboratory: | Dasgupta Lab |
| Last Name: | Dasgupta |
| First Name: | Biplab |
| Address: | Cincinnati, OH |
| Email: | biplab.dasgupta@cchmc.org |
| Phone: | 513-803-1370 |
Subject:
| Subject ID: | SU000763 |
| Subject Type: | Human |
| Subject Species: | Homo sapiens |
| Taxonomy ID: | 9606 |
| Species Group: | Human |
Factors:
Subject type: Human; Subject species: Homo sapiens (Factor headings shown in green)
| mb_sample_id | local_sample_id | Treatment | Type |
|---|---|---|---|
| SA041158 | S00026333 | 0.2% O2 | WT |
| SA041159 | S00026334 | 0.2% O2 | WT |
| SA041160 | S00026332 | 0.5% O2 | WT |
| SA041161 | S00026331 | 0.5% O2 | WT |
| SA041162 | S00026330 | 1% O2 | WT |
| SA041163 | S00026329 | 1% O2 | WT |
| SA041164 | S00026328 | none | HD |
| SA041165 | S00026325 | none | HSCD |
| SA041166 | S00026326 | none | LSCD |
| SA041167 | S00026327 | none | WT |
| Showing results 1 to 10 of 10 |
Collection:
| Collection ID: | CO000757 |
| Collection Summary: | - |
| Sample Type: | Tumor cells |
Treatment:
| Treatment ID: | TR000777 |
| Treatment Summary: | - |
Sample Preparation:
| Sampleprep ID: | SP000770 |
| Sampleprep Summary: | - |
| Sampleprep Protocol Filename: | A011_-_Glycolysis-TCA-nucleotides.pdf |
Combined analysis:
| Analysis ID | AN001154 |
|---|---|
| Analysis type | MS |
| Chromatography type | GC |
| Chromatography system | Agilent 7890N |
| Column | Agilent HP5-MS (15m × 0.25mm, 0.25 um) |
| MS Type | EI |
| MS instrument type | Single quadrupole |
| MS instrument name | Agilent 5975 |
| Ion Mode | POSITIVE |
| Units | pmol/mg protein |
Chromatography:
| Chromatography ID: | CH000814 |
| Instrument Name: | Agilent 7890N |
| Column Name: | Agilent HP5-MS (15m × 0.25mm, 0.25 um) |
| Chromatography Type: | GC |
MS:
| MS ID: | MS001049 |
| Analysis ID: | AN001154 |
| Instrument Name: | Agilent 5975 |
| Instrument Type: | Single quadrupole |
| MS Type: | EI |
| Ion Mode: | POSITIVE |
| Analysis Protocol File: | A011_-_Glycolysis-TCA-nucleotides.pdf |
