Summary of Study ST000766

This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000552. The data can be accessed directly via it's Project DOI: 10.21228/M89T0Z This work is supported by NIH grant, U2C- DK119886.

See: https://www.metabolomicsworkbench.org/about/howtocite.php

This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.

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Study IDST000766
Study TitleDifferences in metabolite profiles and antioxidant activities between wild and cultivated black soybeans evaluated by a correlation analysis (part II)
Study TypeMS analysis
Study SummaryNon-targeted metabolic profiling of 26 soybean varieties using liquid chromatography-mass spectrometry (LC-MS) including 15 wild black soybeans (WBS) and 11 cultivated black soybeans (CBS), combined with multivariate analysis, revealed significant differences in 25 differential metabolites
Institute
KIST
Last NameXu
First NameJiuliang
Addresssaimdang-ro 679, Gangneung, Gangwon, 213510, Korea, South
Email213510@kist.re.kr
Phone01024398802
Submit Date2017-07-04
Raw Data File Type(s)cdf
Analysis Type DetailLC-MS
Release Date2017-07-07
Release Version1
Jiuliang Xu Jiuliang Xu
https://dx.doi.org/10.21228/M89T0Z
ftp://www.metabolomicsworkbench.org/Studies/ application/zip

Select appropriate tab below to view additional metadata details:

Project:

Project ID:PR000552
Project DOI:doi: 10.21228/M89T0Z
Project Title:Soybean project
Project Summary:Non-targeted metabolic profiling of 26 soybean varieties using liquid chromatography-mass spectrometry (LC-MS) including 15 wild black soybeans (WBS) and 11 cultivated black soybeans (CBS), combined with multivariate analysis, revealed significant differences in 25 differential metabolites
Institute:KIST
Last Name:Xu
First Name:Jiuliang
Address:saimdang-ro 679, Gangneung, Gangwon, 213510, Korea, South
Email:213510@kist.re.kr
Phone:01024398802

Subject:

Subject ID:SU000789
Subject Type:plant
Subject Species:Glycine max
Taxonomy ID:3847
Species Group:Plants

Factors:

Subject type: plant; Subject species: Glycine max (Factor headings shown in green)

mb_sample_id local_sample_id type
SA04204914_CBS_11Cultivar
SA04205013_CBS_10Cultivar
SA04205118_CBS_QC2Cultivar
SA04205228_CBS_QC3Cultivar
SA04205301_CBS_1Cultivar
SA04205412_CBS_9Cultivar
SA04205508_CBS_QC1Cultivar
SA04205603_CBS_3Cultivar
SA04205711_CBS_8Cultivar
SA04205802_CBS_2Cultivar
SA04205905_CBS_5Cultivar
SA04206004_CBS_4Cultivar
SA04206107_CBS_7Cultivar
SA04206206_CBS_6Cultivar
SA04206334_WBS_14Wild
SA04206433_WBS_13Wild
SA04206532_WBS_12Wild
SA04206635_WBS_15Wild
SA04206729_WBS_QC3Wild
SA04206831_WBS_11Wild
SA04206919_WBS_QC2Wild
SA04207009_WBS_QC1Wild
SA04207117_WBS_3Wild
SA04207221_WBS_4Wild
SA04207316_WBS_2Wild
SA04207415_WBS_1Wild
SA04207522_WBS_5Wild
SA04207623_WBS_6Wild
SA04207726_WBS_9Wild
SA04207825_WBS_8Wild
SA04207924_WBS_7Wild
SA04208027_WBS_10Wild
Showing results 1 to 32 of 32

Collection:

Collection ID:CO000783
Collection Summary:Fifteen wild and 11 cultivated black soybeans were selected from the soybean germplasm collections that have been maintained by the National Institute of Crop Science in Korea
Sample Type:Plant

Treatment:

Treatment ID:TR000803
Treatment Summary:The planting density was 15 cm between plants in a row, and the rows were 70 cm apart. Field management, including irrigation, fertilizer application, and pest control followed essentially normal agricultural practices according to Rural Development Administration standard protocol

Sample Preparation:

Sampleprep ID:SP000796
Sampleprep Summary:Dried black soybeans were ground into a fine powder and sieved through a screen with a 55 mesh count, then 40 mg of the powder was mixed with 70% aqueous methanol (4mL, 1% HCl) containing 1.5 μg/ml phlorizin as an internal standard and sonicated for 30 min. The mixture was kept for approximately 16 h at room temperature in the dark.vacuum.Supernatants were filtered through a 0.20-μm syringe filter and freeze dried then reconstituted with 0.5 ml of 50% aqueous methanol for LC-MS analysis.

Chromatography:

Chromatography ID:CH000849
Instrument Name:Agilent 1290
Column Name:Prevail C18
Chromatography Type:Reversed phase

Analysis:

Analysis ID:AN001212
Analysis Type:MS
Instrument Name:Bruker Daltonics
Chromatography ID:CH000849
Num Factors:2
Has Mz:1
Has Rt:1
Rt Units:Minutes
Results File:ST000766_AN001212_Results.txt
Units:peal area
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