Summary of Study ST000769

This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000555. The data can be accessed directly via it's Project DOI: 10.21228/M8XM3M This work is supported by NIH grant, U2C- DK119886.

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Study IDST000769
Study TitleMetabolomics of Lin-Sca1+Kit+ (LSK) cells in NM mice
Study TypeMS analysis
Study SummaryLSKs from transgenic mice are harvested and sorted via flow cytometry. They are collected after two sorts as DAPI-, Lineage-, Sca1+, c-kit+ cells.
Institute
University of Michigan
DepartmentBiomedical Research Core Facilities
LaboratoryMetabolomics core
Last NameKachman
First NameMaureen
Address6300 Brehm Tower, 1000 Wall Street, Ann Arbor, MI 48105-5714
Emailmkachman@med.umich.edu
Phone(734) 232-8175
Submit Date2017-06-19
Num Groups2
Total Subjects1
Raw Data AvailableYes
Raw Data File Type(s)d
Analysis Type DetailGC-MS
Release Date2017-12-06
Release Version1
Maureen Kachman Maureen Kachman
https://dx.doi.org/10.21228/M8XM3M
ftp://www.metabolomicsworkbench.org/Studies/ application/zip

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Project:

Project ID:PR000555
Project DOI:doi: 10.21228/M8XM3M
Project Title:Oncogenic Ras-induced metabolic perturbations
Project Type:MS analysis
Project Summary:Oncogenic Ras-induced metabolic perturbations
Institute:University of Michigan
Department:Internal Med and Cellular and Molecular Biology
Laboratory:Li, Qing Lab
Last Name:Li
First Name:Qing
Address:Ann Arbor, MI
Email:lqing@umich.edu
Phone:734-763-8624

Subject:

Subject ID:SU000792
Subject Type:Mouse
Subject Species:Mus musculus
Taxonomy ID:10090
Species Group:Mammals

Factors:

Subject type: Mouse; Subject species: Mus musculus (Factor headings shown in green)

mb_sample_id local_sample_id Type
SA042090S00026009mutant ras
SA042089S00026008WT ras
Showing results 1 to 2 of 2

Collection:

Collection ID:CO000786
Collection Summary:-
Sample Type:Bone marrow

Treatment:

Treatment ID:TR000806
Treatment Summary:-

Sample Preparation:

Sampleprep ID:SP000799
Sampleprep Summary:-
Sampleprep Protocol Filename:A011_-_Glycolysis-TCA-nucleotides.pdf

Combined analysis:

Analysis ID AN001216
Analysis type MS
Chromatography type GC
Chromatography system Agilent 7890N
Column Agilent HP5-MS (15m × 0.25mm, 0.25 um)
MS Type EI
MS instrument type Single quadrupole
MS instrument name Agilent 5975
Ion Mode POSITIVE
Units uM/ng protein

Chromatography:

Chromatography ID:CH000852
Instrument Name:Agilent 7890N
Column Name:Agilent HP5-MS (15m × 0.25mm, 0.25 um)
Chromatography Type:GC

MS:

MS ID:MS001111
Analysis ID:AN001216
Instrument Name:Agilent 5975
Instrument Type:Single quadrupole
MS Type:EI
Ion Mode:POSITIVE
Analysis Protocol File:A011_-_Glycolysis-TCA-nucleotides.pdf
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