Summary of Study ST000829

This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000590. The data can be accessed directly via it's Project DOI: 10.21228/M8DD48 This work is supported by NIH grant, U2C- DK119886.

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Study IDST000829
Study Title12 weeks control & STZ B6 mice retina & plasma amino acid analysis
Study TypeMS analysis
Study SummaryMice were injected with vehicle or STZ to induce diabetes. After 12 weeks, retinas and plasma were harvested.
Institute
University of Michigan
DepartmentBiomedical Research Core Facilities
LaboratoryMetabolomics core
Last NameKachman
First NameMaureen
Address6300 Brehm Tower, 1000 Wall Street, Ann Arbor, MI 48105-5714
Emailmkachman@med.umich.edu
Phone(734) 232-8175
Submit Date2017-08-02
Num Groups4
Total Subjects2
Raw Data AvailableYes
Raw Data File Type(s)d
Analysis Type DetailGC-MS
Release Date2017-10-11
Release Version1
Maureen Kachman Maureen Kachman
https://dx.doi.org/10.21228/M8DD48
ftp://www.metabolomicsworkbench.org/Studies/ application/zip

Select appropriate tab below to view additional metadata details:

Project:

Project ID:PR000590
Project DOI:doi: 10.21228/M8DD48
Project Title:Mice Retina & Plasma Studies
Project Type:MS analysis
Project Summary:Control and 12W STZ B6 Mice Retina and Plasma
Institute:University of Michigan
Department:Ophthalmology and Visual Sciences
Laboratory:Abcouwer Lab
Last Name:Abcouwer
First Name:Steven
Address:Ann Arbor, MI
Email:sabcouwe@umich.edu
Phone:734-232-8227

Subject:

Subject ID:SU000855
Subject Type:MOUSE
Subject Species:Mus musculus
Taxonomy ID:10090
Species Group:Mammals

Factors:

Subject type: MOUSE; Subject species: Mus musculus (Factor headings shown in green)

mb_sample_id local_sample_id Sample type Type
SA046435S00019165Plasma 12W STZ
SA046436S00019164Plasma 12W STZ
SA046437S00019162Plasma 12W STZ
SA046438S00019167Plasma 12W STZ
SA046439S00019163Plasma 12W STZ
SA046440S00019166Plasma 12W STZ
SA046441S00019171Plasma 12W STZ
SA046442S00019169Plasma 12W STZ
SA046443S00019170Plasma 12W STZ
SA046444S00019168Plasma 12W STZ
SA046445S00019159Plasma Control
SA046446S00019160Plasma Control
SA046447S00019161Plasma Control
SA046448S00019158Plasma Control
SA046449S00019157Plasma Control
SA046450S00019151Retina 12W STZ
SA046451S00019149Retina 12W STZ
SA046452S00019148Retina 12W STZ
SA046453S00019147Retina 12W STZ
SA046454S00019152Retina 12W STZ
SA046455S00019150Retina 12W STZ
SA046456S00019153Retina 12W STZ
SA046457S00019155Retina 12W STZ
SA046458S00019156Retina 12W STZ
SA046459S00019154Retina 12W STZ
SA046460S00019143Retina Control
SA046461S00019144Retina Control
SA046462S00019146Retina Control
SA046463S00019142Retina Control
SA046464S00019145Retina Control
Showing results 1 to 30 of 30

Collection:

Collection ID:CO000849
Collection Summary:-
Sample Type:Blood

Treatment:

Treatment ID:TR000869
Treatment Summary:-

Sample Preparation:

Sampleprep ID:SP000862
Sampleprep Summary:-
Sampleprep Protocol Filename:A005_Amino_Acids.pdf

Combined analysis:

Analysis ID AN001321 AN001322
Analysis type MS MS
Chromatography type GC GC
Chromatography system Agilent 7890N Agilent 7890N
Column Zebron ZB-AAA Amino Acid Analysis 10m x 0.25mm (Phenomenex) Zebron ZB-AAA Amino Acid Analysis 10m x 0.25mm (Phenomenex)
MS Type EI EI
MS instrument type Single quadrupole Single quadrupole
MS instrument name Agilent 5975 Agilent 5975
Ion Mode POSITIVE POSITIVE
Units uM umol/ug protein

Chromatography:

Chromatography ID:CH000923
Instrument Name:Agilent 7890N
Column Name:Zebron ZB-AAA Amino Acid Analysis 10m x 0.25mm (Phenomenex)
Chromatography Type:GC

MS:

MS ID:MS001213
Analysis ID:AN001321
Instrument Name:Agilent 5975
Instrument Type:Single quadrupole
MS Type:EI
Ion Mode:POSITIVE
Analysis Protocol File:A005_Amino_Acids.pdf
  
MS ID:MS001214
Analysis ID:AN001322
Instrument Name:Agilent 5975
Instrument Type:Single quadrupole
MS Type:EI
Ion Mode:POSITIVE
Analysis Protocol File:A005_Amino_Acids.pdf
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