Summary of Study ST001146

This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000766. The data can be accessed directly via it's Project DOI: 10.21228/M8P09H This work is supported by NIH grant, U2C- DK119886.

See: https://www.metabolomicsworkbench.org/about/howtocite.php

This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.

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Study IDST001146
Study TitleGlobal Nonhuman primate (NHP) urine metabolomics (part-I)
Study TypeNonhuman primate metabolomics
Study SummaryHere, we use global metabolomics to differentiate temporal effects (1 – 60 d) found in nonhuman primate (NHP) urine small molecule signatures after a 4 Gy total body irradiation.
Institute
Georgetown University
Last NamePannkuk
First NameEvan
Address3970 Reservoir Rd, NW New Research Build, washington dc, District of Columbia, 20057, USA
Emailelp44@georgetown.edu
Phone2026875650
Submit Date2019-02-27
Raw Data AvailableYes
Raw Data File Type(s)raw(Waters)
Analysis Type DetailLC-MS
Release Date2019-05-15
Release Version1
Evan Pannkuk Evan Pannkuk
https://dx.doi.org/10.21228/M8P09H
ftp://www.metabolomicsworkbench.org/Studies/ application/zip

Select appropriate tab below to view additional metadata details:

Project:

Project ID:PR000766
Project DOI:doi: 10.21228/M8P09H
Project Title:Nonhuman primate (NHP) radiation metabolomics
Project Summary:Here, we use global metabolomics to differentiate temporal effects (1 – 60 d) found in nonhuman primate (NHP) urine small molecule signatures after a 4 Gy total body irradiation.
Institute:Georgetown University
Last Name:Pannkuk
First Name:Evan
Address:3970 Reservoir Rd, NW New Research Build, washington dc, District of Columbia, 20057, USA
Email:elp44@georgetown.edu
Phone:2026875650

Subject:

Subject ID:SU001211
Subject Type:Mammal
Subject Species:Macaca mulatta
Taxonomy ID:9544

Factors:

Subject type: Mammal; Subject species: Macaca mulatta (Factor headings shown in green)

mb_sample_id local_sample_id Time
SA079585POS_9915d
SA079586POS_10115d
SA079587POS_5715d
SA079588POS_10415d
SA079589POS_5915d
SA079590POS_6315d
SA079591POS_6015d
SA079592POS_3815d
SA079593POS_4515d
SA079594POS_12215d
SA079595POS_131d
SA079596POS_651d
SA079597POS_321d
SA079598POS_1281d
SA079599POS_701d
SA079600POS_711d
SA079601POS_461d
SA079602POS_211d
SA079603POS_581d
SA079604POS_951d
SA079605POS_3721d
SA079606POS_1121d
SA079607POS_10921d
SA079608POS_11021d
SA079609POS_9721d
SA079610POS_7821d
SA079611POS_8621d
SA079612POS_11121d
SA079613POS_2621d
SA079614POS_4821d
SA079615POS_0528d
SA079616POS_8328d
SA079617POS_7428d
SA079618POS_5028d
SA079619POS_3128d
SA079620POS_10828d
SA079621POS_11528d
SA079622POS_10328d
SA079623POS_1828d
SA079624POS_2028d
SA079625POS_773d
SA079626POS_333d
SA079627POS_983d
SA079628POS_823d
SA079629POS_343d
SA079630POS_173d
SA079631POS_1023d
SA079632POS_873d
SA079633POS_1173d
SA079634POS_1263d
SA079635POS_905d
SA079636POS_885d
SA079637POS_1165d
SA079638POS_1125d
SA079639POS_045d
SA079640POS_615d
SA079641POS_235d
SA079642POS_255d
SA079643POS_1145d
SA079644POS_965d
SA079645POS_10060d
SA079646POS_12760d
SA079647POS_9160d
SA079648POS_8960d
SA079649POS_6960d
SA079650POS_4460d
SA079651POS_5260d
SA079652POS_3660d
SA079653POS_1260d
SA079654POS_7260d
SA079655POS_087d
SA079656POS_077d
SA079657POS_857d
SA079658POS_227d
SA079659POS_197d
SA079660POS_1217d
SA079661POS_357d
SA079662POS_847d
SA079663POS_757d
SA079664POS_737d
SA079665POS_09pre
SA079666POS_125pre
SA079667POS_124pre
SA079668POS_123pre
SA079669POS_76pre
SA079670POS_49pre
SA079671POS_06pre
SA079672POS_130pre
SA079673POS_129pre
SA079674POS_10pre
SA079675POS_43pre
SA079676POS_30pre
SA079677POS_56pre
SA079678POS_51pre
SA079679POS_113pre
SA079680POS_24pre
SA079681POS_47pre
SA079682POS_64pre
SA079683POS_62pre
SA079684POS_39pre
Showing results 1 to 100 of 100

Collection:

Collection ID:CO001205
Collection Summary:urine (20 μl) was deproteinated with 80 μl 50% cold acetonitrile with internal standards (2 μM debrisoquine, 176.1188 [M+H]+; 30 μM 4-nitrobenzoic acid, 166.0140 [M-H]-), vortexed, placed on ice for 10 min, and centrifuged for 10 min (10,000 x g, 4°C)
Sample Type:Urine

Treatment:

Treatment ID:TR001226
Treatment Summary:4 Gy at 0.6 Gy/min with a 60Co γ source

Sample Preparation:

Sampleprep ID:SP001219
Sampleprep Summary:urine (20 μl) was deproteinated with 80 μl 50% cold acetonitrile with internal standards (2 μM debrisoquine, 176.1188 [M+H]+; 30 μM 4-nitrobenzoic acid, 166.0140 [M-H]-), vortexed, placed on ice for 10 min, and centrifuged for 10 min (10,000 x g, 4°C)

Combined analysis:

Analysis ID AN001891
Analysis type MS
Chromatography type Reversed phase
Chromatography system Waters Acquity
Column Waters Acquity BEH C18 (50 x 2.1mm,1.7um)
MS Type ESI
MS instrument type QTOF
MS instrument name Waters Synapt G2
Ion Mode UNSPECIFIED
Units peak area

Chromatography:

Chromatography ID:CH001368
Instrument Name:Waters Acquity
Column Name:Waters Acquity BEH C18 (50 x 2.1mm,1.7um)
Chromatography Type:Reversed phase

MS:

MS ID:MS001747
Analysis ID:AN001891
Instrument Name:Waters Synapt G2
Instrument Type:QTOF
MS Type:ESI
MS Comments:None
Ion Mode:UNSPECIFIED
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