Summary of Study ST001147

This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR000766. The data can be accessed directly via it's Project DOI: 10.21228/M8P09H This work is supported by NIH grant, U2C- DK119886.

See: https://www.metabolomicsworkbench.org/about/howtocite.php

This study contains a large results data set and is not available in the mwTab file. It is only available for download via FTP as data file(s) here.

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Study IDST001147
Study TitleGlobal NHP serum metabolomics (part-IV)
Study SummaryHere, we use global metabolomics to differentiate temporal effects (1 – 60 d) found in nonhuman primate (NHP) serum small molecule signatures after a 4 Gy total body irradiation.
Institute
Georgetown University
Last NamePannkuk
First NameEvan
Address3970 Reservoir Rd, NW New Research Build, washington dc, District of Columbia, 20057, USA
Emailelp44@georgetown.edu
Phone2026875650
Submit Date2019-02-28
Raw Data AvailableYes
Raw Data File Type(s)raw(Waters)
Analysis Type DetailLC-MS
Release Date2019-05-15
Release Version1
Evan Pannkuk Evan Pannkuk
https://dx.doi.org/10.21228/M8P09H
ftp://www.metabolomicsworkbench.org/Studies/ application/zip

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Project:

Project ID:PR000766
Project DOI:doi: 10.21228/M8P09H
Project Title:Nonhuman primate (NHP) radiation metabolomics
Project Summary:Here, we use global metabolomics to differentiate temporal effects (1 – 60 d) found in nonhuman primate (NHP) urine small molecule signatures after a 4 Gy total body irradiation.
Institute:Georgetown University
Last Name:Pannkuk
First Name:Evan
Address:3970 Reservoir Rd, NW New Research Build, washington dc, District of Columbia, 20057, USA
Email:elp44@georgetown.edu
Phone:2026875650

Subject:

Subject ID:SU001212
Subject Type:Mammal
Subject Species:Macaca mulatta
Taxonomy ID:9544
Species Group:Mammals

Factors:

Subject type: Mammal; Subject species: Macaca mulatta (Factor headings shown in green)

mb_sample_id local_sample_id Time
SA079685POS_12015d
SA079686POS_12315d
SA079687POS_6915d
SA079688POS_12615d
SA079689POS_7115d
SA079690POS_7615d
SA079691POS_7215d
SA079692POS_4515d
SA079693POS_5415d
SA079694POS_14915d
SA079695POS_141d
SA079696POS_781d
SA079697POS_381d
SA079698POS_1561d
SA079699POS_851d
SA079700POS_861d
SA079701POS_551d
SA079702POS_241d
SA079703POS_701d
SA079704POS_1161d
SA079705POS_4421d
SA079706POS_1221d
SA079707POS_13321d
SA079708POS_13421d
SA079709POS_11821d
SA079710POS_9421d
SA079711POS_10421d
SA079712POS_13521d
SA079713POS_3021d
SA079714POS_5821d
SA079715POS_0528d
SA079716POS_10128d
SA079717POS_9028d
SA079718POS_6028d
SA079719POS_3728d
SA079720POS_13228d
SA079721POS_14028d
SA079722POS_12528d
SA079723POS_2128d
SA079724POS_2328d
SA079725POS_933d
SA079726POS_393d
SA079727POS_1193d
SA079728POS_1003d
SA079729POS_403d
SA079730POS_203d
SA079731POS_1243d
SA079732POS_1063d
SA079733POS_1423d
SA079734POS_1543d
SA079735POS_1095d
SA079736POS_1075d
SA079737POS_1415d
SA079738POS_1365d
SA079739POS_045d
SA079740POS_745d
SA079741POS_275d
SA079742POS_295d
SA079743POS_1395d
SA079744POS_1175d
SA079745POS_12260d
SA079746POS_15560d
SA079747POS_11060d
SA079748POS_10860d
SA079749POS_8460d
SA079750POS_5360d
SA079751POS_6260d
SA079752POS_4360d
SA079753POS_1360d
SA079754POS_8760d
SA079755POS_087d
SA079756POS_077d
SA079757POS_1037d
SA079758POS_267d
SA079759POS_227d
SA079760POS_1487d
SA079761POS_427d
SA079762POS_1027d
SA079763POS_917d
SA079764POS_887d
SA079765POS_10Pre
SA079766POS_152Pre
SA079767POS_151Pre
SA079768POS_150Pre
SA079769POS_92Pre
SA079770POS_59Pre
SA079771POS_06Pre
SA079772POS_158Pre
SA079773POS_157Pre
SA079774POS_11Pre
SA079775POS_52Pre
SA079776POS_36Pre
SA079777POS_68Pre
SA079778POS_61Pre
SA079779POS_138Pre
SA079780POS_28Pre
SA079781POS_56Pre
SA079782POS_77Pre
SA079783POS_75Pre
SA079784POS_46Pre
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Collection:

Collection ID:CO001206
Collection Summary:None
Sample Type:Blood (serum)

Treatment:

Treatment ID:TR001227
Treatment Summary:4 Gy at 0.6 Gy/min with a 60Co γ source

Sample Preparation:

Sampleprep ID:SP001220
Sampleprep Summary:Serum (5 μl) was deproteinated with 195 μl 66% cold acetonitrile with internal standards (2 μM debrisoquine, 176.1188 [M+H]+; 30 μM 4-nitrobenzoic acid, 166.0140 [M-H]-), vortexed, placed on ice for 10 min, and centrifuged for 10 min (10,000 x g, 4°C)
Processing Storage Conditions:On ice
Extract Storage:On ice

Chromatography:

Chromatography ID:CH001369
Instrument Name:Waters Acquity
Column Name:Waters Acquity BEH C18 (50 x 2.1mm,1.7um)
Chromatography Type:Reversed phase

Analysis:

Analysis ID:AN001892
Analysis Type:MS
Chromatography ID:CH001369
Num Factors:9
Has Mz:1
Has Rt:1
Rt Units:Minutes
Results File:ST001147_AN001892_Results.txt
Units:peak area
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