Summary of Study ST001785
This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR001134. The data can be accessed directly via it's Project DOI: 10.21228/M8470J This work is supported by NIH grant, U2C- DK119886.
See: https://www.metabolomicsworkbench.org/about/howtocite.php
Study ID | ST001785 |
Study Title | The human lipidome via NMR |
Study Summary | The study population includes 844 healthy volunteers of which 183 women and 661 men, with a median age of 43 ± 12 yrs and 40 ± 11 yrs, respectively. The participants in this study were selected from the Tus-cany section of the Italian Association of Blood Donors (AVIS) in the Transfusion Service of the Pistoia Hospital. Plasma samples were obtained according to the Italian guidelines for blood donations. How age and sex influence the human metabolome and lipidome were investigated. |
Institute | University of Florence |
Department | CERM |
Last Name | Vignoli |
First Name | Alessia |
Address | Via Luigi Sacconi 6 |
vignoli@cerm.unifi.it | |
Phone | 0554574281 |
Submit Date | 2021-04-26 |
Analysis Type Detail | NMR |
Release Date | 2021-05-25 |
Release Version | 1 |
Select appropriate tab below to view additional metadata details:
Project:
Project ID: | PR001134 |
Project DOI: | doi: 10.21228/M8470J |
Project Title: | Lipidomics on healthy blood donors |
Project Summary: | The study population includes 844 healthy volunteers of which 183 women and 661 men, with a median age of 43 ± 12 yrs and 40 ± 11 yrs, respectively. The participants in this study were selected from the Tus-cany section of the Italian Association of Blood Donors (AVIS) in the Transfusion Service of the Pistoia Hospital. Plasma samples were obtained according to the Italian guidelines for blood donations. How age and sex influence the human lipidome were investigated. |
Institute: | University of Florence |
Department: | CERM |
Last Name: | Vignoli |
First Name: | Alessia |
Address: | Via Luigi Sacconi 6, Sesto Fiorentino, Italia, 50019, Italy |
Email: | vignoli@cerm.unifi.it |
Phone: | +390554574281 |
Publications: | Vignoli, A.; Tenori, L.; Luchinat, C.; Saccenti, E. Age and sex effects on plasma metabolite association networks in healthy subjects. Journal of Proteome Research 2018, 17, 97-107. Saccenti, E.; Suarez-Diez, M.; Luchinat, C.; Santucci, C.; Tenori, L. Probabilistic networks of blood metabolites in healthy subjects as indicators of latent cardiovascular risk. Journal of Proteome Research 2014, 14, 1101--1111. Vignoli, A.; Tenori, L.; Luchinat, C.; Saccenti, E. Differential network analysis reveals molecular determinants associated with blood pressure and heart rate in healthy subjects. Journal of Proteome Research 2020. |
Subject:
Subject ID: | SU001862 |
Subject Type: | Human |
Subject Species: | Homo sapiens |
Taxonomy ID: | 9606 |
Age Or Age Range: | 18-60 |
Factors:
Subject type: Human; Subject species: Homo sapiens (Factor headings shown in green)
mb_sample_id | local_sample_id | Gender |
---|---|---|
SA165375 | AVI00325 | Female |
SA165376 | AVI00147 | Female |
SA165377 | AVI00326 | Female |
SA165378 | AVI00551 | Female |
SA165379 | AVI00148 | Female |
SA165380 | AVI00673 | Female |
SA165381 | AVI00669 | Female |
SA165382 | AVI00768 | Female |
SA165383 | AVI00141 | Female |
SA165384 | AVI00599 | Female |
SA165385 | AVI00144 | Female |
SA165386 | AVI00556 | Female |
SA165387 | AVI00235 | Female |
SA165388 | AVI00749 | Female |
SA165389 | AVI00373 | Female |
SA165390 | AVI00745 | Female |
SA165391 | AVI00563 | Female |
SA165392 | AVI00236 | Female |
SA165393 | AVI00392 | Female |
SA165394 | AVI00597 | Female |
SA165395 | AVI00239 | Female |
SA165396 | AVI00476 | Female |
SA165397 | AVI00598 | Female |
SA165398 | AVI00774 | Female |
SA165399 | AVI00535 | Female |
SA165400 | AVI00660 | Female |
SA165401 | AVI00404 | Female |
SA165402 | AVI00538 | Female |
SA165403 | AVI00314 | Female |
SA165404 | AVI00610 | Female |
SA165405 | AVI00798 | Female |
SA165406 | AVI00261 | Female |
SA165407 | AVI00411 | Female |
SA165408 | AVI00532 | Female |
SA165409 | AVI00608 | Female |
SA165410 | AVI00783 | Female |
SA165411 | AVI00252 | Female |
SA165412 | AVI00132 | Female |
SA165413 | AVI00133 | Female |
SA165414 | AVI00371 | Female |
SA165415 | AVI00777 | Female |
SA165416 | AVI00542 | Female |
SA165417 | AVI00781 | Female |
SA165418 | AVI00123 | Female |
SA165419 | AVI00124 | Female |
SA165420 | AVI00125 | Female |
SA165421 | AVI00393 | Female |
SA165422 | AVI00742 | Female |
SA165423 | AVI00201 | Female |
SA165424 | AVI00713 | Female |
SA165425 | AVI00712 | Female |
SA165426 | AVI00224 | Female |
SA165427 | AVI00715 | Female |
SA165428 | AVI00716 | Female |
SA165429 | AVI00337 | Female |
SA165430 | AVI00353 | Female |
SA165431 | AVI00577 | Female |
SA165432 | AVI00198 | Female |
SA165433 | AVI00581 | Female |
SA165434 | AVI00698 | Female |
SA165435 | AVI00343 | Female |
SA165436 | AVI00216 | Female |
SA165437 | AVI00703 | Female |
SA165438 | AVI00702 | Female |
SA165439 | AVI00214 | Female |
SA165440 | AVI00341 | Female |
SA165441 | AVI00209 | Female |
SA165442 | AVI00707 | Female |
SA165443 | AVI00699 | Female |
SA165444 | AVI00212 | Female |
SA165445 | AVI00721 | Female |
SA165446 | AVI00191 | Female |
SA165447 | AVI00690 | Female |
SA165448 | AVI00591 | Female |
SA165449 | AVI00570 | Female |
SA165450 | AVI00733 | Female |
SA165451 | AVI00173 | Female |
SA165452 | AVI00368 | Female |
SA165453 | AVI00799 | Female |
SA165454 | AVI00566 | Female |
SA165455 | AVI00740 | Female |
SA165456 | AVI00738 | Female |
SA165457 | AVI00732 | Female |
SA165458 | AVI00364 | Female |
SA165459 | AVI00228 | Female |
SA165460 | AVI00357 | Female |
SA165461 | AVI00356 | Female |
SA165462 | AVI00355 | Female |
SA165463 | AVI00186 | Female |
SA165464 | AVI00726 | Female |
SA165465 | AVI00571 | Female |
SA165466 | AVI00181 | Female |
SA165467 | AVI00336 | Female |
SA165468 | AVI00574 | Female |
SA165469 | AVI00743 | Female |
SA165470 | AVI00408 | Female |
SA165471 | AVI00494 | Female |
SA165472 | AVI00040 | Female |
SA165473 | AVI00849 | Female |
SA165474 | AVI00451 | Female |
Collection:
Collection ID: | CO001855 |
Collection Summary: | Plasma samples were obtained according to the Italian guidelines for blood donations restricting donors of age 18−60 years, body weight >50 kg, systolic blood pressure 110−148 mmHg, diastolic blood pressure 60−100 mmHg, absence of (manifested) infectious diseases, absence of chronic diseases, no current menstruation, no consumption of medicines within 1 week before donation (bd), no common diseases (such as flu, cold, bron-chitis) within 2 weeks bd, no surgery within 3 months bd, no endoscopic exams within 4 months bd, no pregnancy within 12 months bd, no abor-tion within 4 months bd, no travel to tropical countries within 6 months bd, and, in particular, no sport activity within 24 h bd. Further details can be found in our previous publications. |
Sample Type: | Blood (plasma) |
Storage Conditions: | -80℃ |
Treatment:
Treatment ID: | TR001875 |
Treatment Summary: | No treatment. |
Sample Preparation:
Sampleprep ID: | SP001868 |
Sampleprep Summary: | Frozen plasma samples were thawed at room temperature and shaken before use (Bernini et al. 2011). A total of 300 μL of a sodium phosphate buffer (10.05 g Na2HPO4·7H2O; 0.2 g NaN3; 0.4 g sodium trimethylsilyl [2,2,3,3-2H4] pro-pionate (TMSP) in 500 mL of H2O with 20% (v/v) 2H2O; pH 7.4) was added to 300 μL of each plasma sample, and the mixture was homogenized by vortexing for 30 seconds. A total of 450 μL of this mixture was transferred to a 4.25 mm NMR tube (Bruker BioSpin srl) for analysis. |
Analysis:
Analysis ID: | AN002896 |
Laboratory Name: | CERM |
Analysis Type: | NMR |
Num Factors: | 2 |
Num Metabolites: | 28 |
Units: | mg/dL |
NMR:
NMR ID: | NM000205 |
Analysis ID: | AN002896 |
Instrument Name: | Bruker 600 Advanced III |
Instrument Type: | FT-NMR |
NMR Experiment Type: | 1D-1H |
Spectrometer Frequency: | 600 |
Temperature: | 310 |