Summary of Study ST001785

This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR001134. The data can be accessed directly via it's Project DOI: 10.21228/M8470J This work is supported by NIH grant, U2C- DK119886.

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Study IDST001785
Study TitleThe human lipidome via NMR
Study SummaryThe study population includes 844 healthy volunteers of which 183 women and 661 men, with a median age of 43 ± 12 yrs and 40 ± 11 yrs, respectively. The participants in this study were selected from the Tus-cany section of the Italian Association of Blood Donors (AVIS) in the Transfusion Service of the Pistoia Hospital. Plasma samples were obtained according to the Italian guidelines for blood donations. How age and sex influence the human metabolome and lipidome were investigated.
Institute
University of Florence
DepartmentCERM
Last NameVignoli
First NameAlessia
AddressVia Luigi Sacconi 6
Emailvignoli@cerm.unifi.it
Phone0554574281
Submit Date2021-04-26
Analysis Type DetailNMR
Release Date2021-05-25
Release Version1
Alessia Vignoli Alessia Vignoli
https://dx.doi.org/10.21228/M8470J
ftp://www.metabolomicsworkbench.org/Studies/ application/zip

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Project:

Project ID:PR001134
Project DOI:doi: 10.21228/M8470J
Project Title:Lipidomics on healthy blood donors
Project Summary:The study population includes 844 healthy volunteers of which 183 women and 661 men, with a median age of 43 ± 12 yrs and 40 ± 11 yrs, respectively. The participants in this study were selected from the Tus-cany section of the Italian Association of Blood Donors (AVIS) in the Transfusion Service of the Pistoia Hospital. Plasma samples were obtained according to the Italian guidelines for blood donations. How age and sex influence the human lipidome were investigated.
Institute:University of Florence
Department:CERM
Last Name:Vignoli
First Name:Alessia
Address:Via Luigi Sacconi 6, Sesto Fiorentino, Italia, 50019, Italy
Email:vignoli@cerm.unifi.it
Phone:+390554574281
Publications:Vignoli, A.; Tenori, L.; Luchinat, C.; Saccenti, E. Age and sex effects on plasma metabolite association networks in healthy subjects. Journal of Proteome Research 2018, 17, 97-107. Saccenti, E.; Suarez-Diez, M.; Luchinat, C.; Santucci, C.; Tenori, L. Probabilistic networks of blood metabolites in healthy subjects as indicators of latent cardiovascular risk. Journal of Proteome Research 2014, 14, 1101--1111. Vignoli, A.; Tenori, L.; Luchinat, C.; Saccenti, E. Differential network analysis reveals molecular determinants associated with blood pressure and heart rate in healthy subjects. Journal of Proteome Research 2020.

Subject:

Subject ID:SU001862
Subject Type:Human
Subject Species:Homo sapiens
Taxonomy ID:9606
Age Or Age Range:18-60

Factors:

Subject type: Human; Subject species: Homo sapiens (Factor headings shown in green)

mb_sample_id local_sample_id Gender
SA165375AVI00325Female
SA165376AVI00147Female
SA165377AVI00326Female
SA165378AVI00551Female
SA165379AVI00148Female
SA165380AVI00673Female
SA165381AVI00669Female
SA165382AVI00768Female
SA165383AVI00141Female
SA165384AVI00599Female
SA165385AVI00144Female
SA165386AVI00556Female
SA165387AVI00235Female
SA165388AVI00749Female
SA165389AVI00373Female
SA165390AVI00745Female
SA165391AVI00563Female
SA165392AVI00236Female
SA165393AVI00392Female
SA165394AVI00597Female
SA165395AVI00239Female
SA165396AVI00476Female
SA165397AVI00598Female
SA165398AVI00774Female
SA165399AVI00535Female
SA165400AVI00660Female
SA165401AVI00404Female
SA165402AVI00538Female
SA165403AVI00314Female
SA165404AVI00610Female
SA165405AVI00798Female
SA165406AVI00261Female
SA165407AVI00411Female
SA165408AVI00532Female
SA165409AVI00608Female
SA165410AVI00783Female
SA165411AVI00252Female
SA165412AVI00132Female
SA165413AVI00133Female
SA165414AVI00371Female
SA165415AVI00777Female
SA165416AVI00542Female
SA165417AVI00781Female
SA165418AVI00123Female
SA165419AVI00124Female
SA165420AVI00125Female
SA165421AVI00393Female
SA165422AVI00742Female
SA165423AVI00201Female
SA165424AVI00713Female
SA165425AVI00712Female
SA165426AVI00224Female
SA165427AVI00715Female
SA165428AVI00716Female
SA165429AVI00337Female
SA165430AVI00353Female
SA165431AVI00577Female
SA165432AVI00198Female
SA165433AVI00581Female
SA165434AVI00698Female
SA165435AVI00343Female
SA165436AVI00216Female
SA165437AVI00703Female
SA165438AVI00702Female
SA165439AVI00214Female
SA165440AVI00341Female
SA165441AVI00209Female
SA165442AVI00707Female
SA165443AVI00699Female
SA165444AVI00212Female
SA165445AVI00721Female
SA165446AVI00191Female
SA165447AVI00690Female
SA165448AVI00591Female
SA165449AVI00570Female
SA165450AVI00733Female
SA165451AVI00173Female
SA165452AVI00368Female
SA165453AVI00799Female
SA165454AVI00566Female
SA165455AVI00740Female
SA165456AVI00738Female
SA165457AVI00732Female
SA165458AVI00364Female
SA165459AVI00228Female
SA165460AVI00357Female
SA165461AVI00356Female
SA165462AVI00355Female
SA165463AVI00186Female
SA165464AVI00726Female
SA165465AVI00571Female
SA165466AVI00181Female
SA165467AVI00336Female
SA165468AVI00574Female
SA165469AVI00743Female
SA165470AVI00408Female
SA165471AVI00494Female
SA165472AVI00040Female
SA165473AVI00849Female
SA165474AVI00451Female
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Collection:

Collection ID:CO001855
Collection Summary:Plasma samples were obtained according to the Italian guidelines for blood donations restricting donors of age 18−60 years, body weight >50 kg, systolic blood pressure 110−148 mmHg, diastolic blood pressure 60−100 mmHg, absence of (manifested) infectious diseases, absence of chronic diseases, no current menstruation, no consumption of medicines within 1 week before donation (bd), no common diseases (such as flu, cold, bron-chitis) within 2 weeks bd, no surgery within 3 months bd, no endoscopic exams within 4 months bd, no pregnancy within 12 months bd, no abor-tion within 4 months bd, no travel to tropical countries within 6 months bd, and, in particular, no sport activity within 24 h bd. Further details can be found in our previous publications.
Sample Type:Blood (plasma)
Storage Conditions:-80℃

Treatment:

Treatment ID:TR001875
Treatment Summary:No treatment.

Sample Preparation:

Sampleprep ID:SP001868
Sampleprep Summary:Frozen plasma samples were thawed at room temperature and shaken before use (Bernini et al. 2011). A total of 300 μL of a sodium phosphate buffer (10.05 g Na2HPO4·7H2O; 0.2 g NaN3; 0.4 g sodium trimethylsilyl [2,2,3,3-2H4] pro-pionate (TMSP) in 500 mL of H2O with 20% (v/v) 2H2O; pH 7.4) was added to 300 μL of each plasma sample, and the mixture was homogenized by vortexing for 30 seconds. A total of 450 μL of this mixture was transferred to a 4.25 mm NMR tube (Bruker BioSpin srl) for analysis.

Analysis:

Analysis ID:AN002896
Laboratory Name:CERM
Analysis Type:NMR
Num Factors:2
Num Metabolites:28
Units:mg/dL

NMR:

NMR ID:NM000205
Analysis ID:AN002896
Instrument Name:Bruker 600 Advanced III
Instrument Type:FT-NMR
NMR Experiment Type:1D-1H
Spectrometer Frequency:600
Temperature:310
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