Summary of Study ST002018

This data is available at the NIH Common Fund's National Metabolomics Data Repository (NMDR) website, the Metabolomics Workbench, https://www.metabolomicsworkbench.org, where it has been assigned Project ID PR001281. The data can be accessed directly via it's Project DOI: 10.21228/M84D7X This work is supported by NIH grant, U2C- DK119886.

See: https://www.metabolomicsworkbench.org/about/howtocite.php

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Study IDST002018
Study TitleMulti-omic analysis of the microbiome and metabolome in healthy subjects (feces)
Study SummaryWe conducted multi-omic phenotyping of healthy individuals, in order to investigate the interaction between diet, the microbiome, and the metabolome in a cross-sectional sample. We applied metabolomic profiling (at Metabolon Inc.) to plasma and stool samples in a subset of individuals (N=75).
Institute
Vanderbilt University Medical Center
Last NameFerguson
First NameJane
Address2220 Pierce Ave, PRB 354, Nashville, TN, 37232, USA
Emailjane.f.ferguson@vumc.org
Phone6158759896
Submit Date2021-12-13
Analysis Type DetailLC-MS
Release Date2022-01-17
Release Version1
Jane Ferguson Jane Ferguson
https://dx.doi.org/10.21228/M84D7X
ftp://www.metabolomicsworkbench.org/Studies/ application/zip

Select appropriate tab below to view additional metadata details:

Project:

Project ID:PR001281
Project DOI:doi: 10.21228/M84D7X
Project Title:ABO Metabolomics
Project Summary:We profiled plasma and stool metabolites in 75 healthy individuals in a cross-sectional study design.
Institute:Vanderbilt University Medical Center
Last Name:Ferguson
First Name:Jane
Address:2220 Pierce Ave, PRB 354, Nashville, TN, 37232, USA
Email:jane.f.ferguson@vumc.org
Phone:6158759896

Subject:

Subject ID:SU002100
Subject Type:Human
Subject Species:Homo sapiens
Taxonomy ID:9606
Age Or Age Range:18-50
Gender:Male and female

Factors:

Subject type: Human; Subject species: Homo sapiens (Factor headings shown in green)

mb_sample_id local_sample_id Sex
SA189132081Female
SA189133080Female
SA189134083Female
SA189135084Female
SA189136008Female
SA189137115Female
SA189138116Female
SA189139118Female
SA189140117Female
SA189141075Female
SA189142076Female
SA189143088Female
SA189144089Female
SA189145109Female
SA189146102Female
SA189147103Female
SA189148104Female
SA189149100Female
SA189150099Female
SA189151111Female
SA189152092Female
SA189153093Female
SA189154094Female
SA189155107Female
SA189156071Female
SA189157034Female
SA189158129Female
SA189159128Female
SA189160070Female
SA189161033Female
SA189162029Female
SA189163011Female
SA189164017Female
SA189165133Female
SA189166132Female
SA189167041Female
SA189168040Female
SA189169055Female
SA189170126Female
SA189171120Female
SA189172124Female
SA189173047Female
SA189174061Female
SA189175046Female
SA189176121Male
SA189177119Male
SA189178108Male
SA189179110Male
SA189180125Male
SA189181112Male
SA189182122Male
SA189183130Male
SA189184085Male
SA189185042Male
SA189186045Male
SA189187048Male
SA189188058Male
SA189189039Male
SA189190035Male
SA189191014Male
SA189192018Male
SA189193023Male
SA189194027Male
SA189195064Male
SA189196066Male
SA189197090Male
SA189198091Male
SA189199098Male
SA189200101Male
SA189201078Male
SA189202077Male
SA189203068Male
SA189204073Male
SA189205074Male
SA189206106Male
Showing results 1 to 75 of 75

Collection:

Collection ID:CO002093
Collection Summary:Participants provided a fecal sample.
Sample Type:Feces

Treatment:

Treatment ID:TR002112
Treatment Summary:Cross-sectional study, no treatment

Sample Preparation:

Sampleprep ID:SP002106
Sampleprep Summary:Stool samples were collected within the 24 hours prior to the study visit, using a stool collection kit (Commode Specimen Collection System, Fisher Scientific, Pittsburgh PA). Samples were stored at 4˚C and aliquots made within 36 hours of sample collection. Processed samples were stored at -80˚C prior to analysis.

Combined analysis:

Analysis ID AN003288
Analysis type MS
Chromatography type Unspecified
Chromatography system Metabolon LC-MS
Column Metabolon
MS Type ESI
MS instrument type Other
MS instrument name Thermo Q Exactive Orbitrap
Ion Mode UNSPECIFIED
Units scaled imputed

Chromatography:

Chromatography ID:CH002428
Instrument Name:Metabolon LC-MS
Column Name:Metabolon
Chromatography Type:Unspecified

MS:

MS ID:MS003059
Analysis ID:AN003288
Instrument Name:Thermo Q Exactive Orbitrap
Instrument Type:Other
MS Type:ESI
MS Comments:Metabolon
Ion Mode:UNSPECIFIED
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