Metabolomics Structure Database

 
MW REGNO: 13691
Common Name:PC(5:0/5:0)
Systematic Name:1,2-divaleryl-sn-glycero-3-phosphocholine
RefMet Name:PC 5:0/5:0
Synonyms:3,5,9-Trioxa-4-phosphatetradecan-1-aminium, 4-hydroxy-N,N,N-trimethyl-10-oxo-7-[(1-oxopentyl)oxy]-, inner salt, 4-oxide, (R)-; 1,2-Divaleryl-sn-glycero-3-phosphocholine; Divaleroylphosphatidylcholine [PubChem Synonyms]
Exact Mass:
425.2179 (neutral)    Calculate m/z:
Formula:C18H36NO8P
InChIKey:YCBVRDMSFWAKDH-MRXNPFEDSA-N
LIPID MAPS Category:Glycerophospholipids [GP]
LIPID MAPS mainclass:Glycerophosphocholines [GP01]
LIPID MAPS subclass:Diacylglycerophosphocholines [GP0101]
SMILES:CCCCC(=O)OC[C@H](COP(=O)([O-])OCC[N+](C)(C)C)OC(=O)CCCC
Studies:Available studies (via RefMet name)

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External database links:

PubChem CID:24779224
LIPID MAPS ID:LMGP01011225
CHEBI ID:168873

Calculated physicochemical properties (?):

Heavy Atoms: 28  
Rings: 0  
Aromatic Rings: 0  
Rotatable Bonds: 18  
van der Waals Molecular volume: 415.83 Å3 molecule-1  
Toplogical Polar Sufrace Area: 111.19 Å2 molecule-1  
Hydrogen Bond Donors: 0  
Hydrogen Bond Acceptors: 9  
logP: 3.46  
Molar Refractivity: 104.77  
Fraction sp3 Carbons: 0.89  
sp3 Carbons: 16  

References

LIPID MAPS classification: "Update of the LIPID MAPS comprehensive classification system for lipids", Fahy E, Subramaniam S, Murphy RC, Nishijima M, Raetz CR, Shimizu T, Spener F, van Meer G, Wakelam MJ, and Dennis EA, J. Lipid Res. (2009) 50: S9-S14. DOI: 10.1194/jlr.R800095-JLR200
ClassyFire classification: "ClassyFire: automated chemical classification with a comprehensive, computable taxonomy", Djoumbou Feunang Y, Eisner R, Knox C, Chepelev L, Hastings J, Owen G, Fahy E, Steinbeck C, Subramanian S, Bolton E, Greiner R, and Wishart DS, J. Cheminformatics (2016) 8:61. DOI: 10.1186/s13321-016-0174-y

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