Metabolomics Structure Database

 
MW REGNO: 1973
Common Name:Pimelic acid
Systematic Name:Heptanedioic acid
RefMet Name:Pimelic acid
Synonyms: [PubChem Synonyms]
Exact Mass:
160.0736 (neutral)    Calculate m/z:
Formula:C7H12O4
InChIKey:WLJVNTCWHIRURA-UHFFFAOYSA-N
LIPID MAPS Category:Fatty Acyls [FA]
LIPID MAPS mainclass:Fatty Acids and Conjugates [FA01]
LIPID MAPS subclass:Dicarboxylic acids [FA0117]
Massbank MS spectra:View MS spectra
NP-MRD NMR spectra:View NMR spectra
SMILES:C(CCC(=O)O)CCC(=O)O
Studies:Available studies (via RefMet name)

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External database links:

PubChem CID:385
LIPID MAPS ID:LMFA01170051
CHEBI ID:30531
HMDB ID:HMDB0000857
KEGG ID:C02656
Chemspider ID:376
METLIN ID:3280
BMRB ID:bmse000354
NP-MRD ID(NMR):NP0001322
Plant Metabolite Hub(Pmhub):MS000000889

Calculated physicochemical properties (?):

Heavy Atoms: 11  
Rings: 0  
Aromatic Rings: 0  
Rotatable Bonds: 6  
van der Waals Molecular volume: 159.54 Å3 molecule-1  
Toplogical Polar Sufrace Area: 74.60 Å2 molecule-1  
Hydrogen Bond Donors: 2  
Hydrogen Bond Acceptors: 4  
logP: 1.11  
Molar Refractivity: 38.36  
Fraction sp3 Carbons: 0.71  
sp3 Carbons: 5  

References

LIPID MAPS classification: "Update of the LIPID MAPS comprehensive classification system for lipids", Fahy E, Subramaniam S, Murphy RC, Nishijima M, Raetz CR, Shimizu T, Spener F, van Meer G, Wakelam MJ, and Dennis EA, J. Lipid Res. (2009) 50: S9-S14. DOI: 10.1194/jlr.R800095-JLR200
ClassyFire classification: "ClassyFire: automated chemical classification with a comprehensive, computable taxonomy", Djoumbou Feunang Y, Eisner R, Knox C, Chepelev L, Hastings J, Owen G, Fahy E, Steinbeck C, Subramanian S, Bolton E, Greiner R, and Wishart DS, J. Cheminformatics (2016) 8:61. DOI: 10.1186/s13321-016-0174-y

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