Metabolomics Structure Database

 
Created with Raphaël 2.1.0HNHOHOOHH
MW REGNO: 30661
Common Name:Cer(d18:0/18:1(9Z))
Systematic Name:N-(9Z-octadecenoyl)-sphinganine
Synonyms:C18:1DH Cer; N-(9Z-octadecenoyl)-dihydroceramide; N-(oleoyl)-dihydroceramide [PubChem Synonyms]
Exact Mass:
565.5434 (neutral)    Calculate m/z:
Formula:C36H71NO3
InChIKey:MJQIARGPQMNBGT-WWUCIAQXSA-N
LIPID MAPS Category:Sphingolipids [SP]
LIPID MAPS mainclass:Ceramides [SP02]
LIPID MAPS subclass:N-acylsphinganines (dihydroceramides) [SP0202]
SMILES:CCCCCCCC/C=CCCCCCCCC(=O)N[C@@H](CO)[C@@H](CCCCCCCCCCCCCCC)O
Studies:Available studies(via PubChem CID)

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External database links:

PubChem CID:6442676
LIPID MAPS ID:LMSP02020015
CHEBI ID:74100
HMDB ID:HMDB0011763
Chemspider ID:4946740

Calculated physicochemical properties (?):

Heavy Atoms: 40  
Rings: 0  
Aromatic Rings: 0  
Rotatable Bonds: 32  
van der Waals Molecular volume: 663.45 Å3 molecule-1  
Toplogical Polar Sufrace Area: 69.56 Å2 molecule-1  
Hydrogen Bond Donors: 3  
Hydrogen Bond Acceptors: 3  
logP: 11.20  
Molar Refractivity: 176.30  
Fraction sp3 Carbons: 0.92  
sp3 Carbons: 33  

References

LIPID MAPS classification: "Update of the LIPID MAPS comprehensive classification system for lipids", Fahy E, Subramaniam S, Murphy RC, Nishijima M, Raetz CR, Shimizu T, Spener F, van Meer G, Wakelam MJ, and Dennis EA, J. Lipid Res. (2009) 50: S9-S14. DOI: 10.1194/jlr.R800095-JLR200
ClassyFire classification: "ClassyFire: automated chemical classification with a comprehensive, computable taxonomy", Djoumbou Feunang Y, Eisner R, Knox C, Chepelev L, Hastings J, Owen G, Fahy E, Steinbeck C, Subramanian S, Bolton E, Greiner R, and Wishart DS, J. Cheminformatics (2016) 8:61. DOI: 10.1186/s13321-016-0174-y

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