Metabolomics Structure Database

 
MW REGNO: 34382
Common Name:5alpha,6beta-dihydroxycholestanol
Systematic Name:cholestane-3beta,5alpha,6beta-triol
RefMet Name:5alpha,6beta-Dihydroxycholestanol
Synonyms: [PubChem Synonyms]
Exact Mass:
420.3603 (neutral)    Calculate m/z:
Formula:C27H48O3
InChIKey:YMMFNKXZULYSOQ-RUXQDQFYSA-N
LIPID MAPS Category:Sterol Lipids [ST]
LIPID MAPS mainclass:Sterols [ST01]
LIPID MAPS subclass:Cholesterol and derivatives [ST0101]
SMILES:CC(C)CCC[C@@H](C)[C@H]1CC[C@H]2[C@@H]3C[C@H]([C@]4(C[C@H](CC[C@]4(C)[C@H]3CC[C@]12C)O)O)O
Studies:Available studies (via RefMet name)

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External database links:

PubChem CID:91498
LIPID MAPS ID:LMST01010052
CHEBI ID:28082
HMDB ID:HMDB0003990
KEGG ID:C05425
Chemspider ID:82619
METLIN ID:6997
MetaCyc ID:CPD-8896
Plant Metabolite Hub(Pmhub):MS000018705

Calculated physicochemical properties (?):

Heavy Atoms: 30  
Rings: 4  
Aromatic Rings: 0  
Rotatable Bonds: 5  
van der Waals Molecular volume: 452.59 Å3 molecule-1  
Toplogical Polar Sufrace Area: 60.69 Å2 molecule-1  
Hydrogen Bond Donors: 3  
Hydrogen Bond Acceptors: 3  
logP: 6.41  
Molar Refractivity: 123.46  
Fraction sp3 Carbons: 1.00  
sp3 Carbons: 27  

References

LIPID MAPS classification: "Update of the LIPID MAPS comprehensive classification system for lipids", Fahy E, Subramaniam S, Murphy RC, Nishijima M, Raetz CR, Shimizu T, Spener F, van Meer G, Wakelam MJ, and Dennis EA, J. Lipid Res. (2009) 50: S9-S14. DOI: 10.1194/jlr.R800095-JLR200
ClassyFire classification: "ClassyFire: automated chemical classification with a comprehensive, computable taxonomy", Djoumbou Feunang Y, Eisner R, Knox C, Chepelev L, Hastings J, Owen G, Fahy E, Steinbeck C, Subramanian S, Bolton E, Greiner R, and Wishart DS, J. Cheminformatics (2016) 8:61. DOI: 10.1186/s13321-016-0174-y

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