Metabolomics Structure Database

MDLMOL SDF CSV TSV

MW REGNO:	37640
Common Name:	Cytidine monophosphate N-acetylneuraminic acid
Systematic Name:	(2R,4S,5R,6R)-2-[({[(2R,3S,4R,5R)-5-(4-amino-2-oxo-1,2-dihydropyrimidin-1-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy]-5-acetamido-4-hydroxy-6-[(1R,2R)-1,2,3-trihydroxypropyl]oxane-2-carboxylic acid
RefMet Name:	CMP-N-acetylneuraminic acid
Synonyms:	[PubChem Synonyms]
Exact Mass:	614.1473 (neutral)    Calculate m/z: (Choose adduct) [M+H]+ [M+H-H2O]+ [M.]+ [M+2H]2+ [M+3H]3+ [M+4H]4+ [M+K]+ [M+2K]2+ [M-H+2K]+ [M+Na]+ [M+2Na]2+ [M-H+2Na]+ [M+Li]+ [M+2Li]2+ [M+NH4]+ [M-H]- [M-2H]2- [M-3H]3- [M-4H]4- [M+Cl]- [M+OAc]- [M+HCOO]- M(neutral)
Formula:	C20H31N4O16P
InChIKey:	TXCIAUNLDRJGJZ-BILDWYJOSA-N
ClassyFire superclass:	Nucleosides, nucleotides, and analogues [C0000289]
ClassyFire class:	Pyrimidine nucleotides [C0001509]
ClassyFire subclass:	Pyrimidine nucleotide sugars [C0001296]
ClassyFire direct parent:	Pyrimidine nucleotide sugars [C0001296]
SMILES:	CC(=O)N[C@@H]1[C@H](C[C@@](C(=O)O)(O[C@H]1[C@@H]([C@@H](CO)O)O)OP(=O)(O)OC[C@@H]1[C@H]([C@H]([C@H](n2ccc(N)nc2=O)O1)O)O)O
Studies:	Available studies (via RefMet name)

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All Database Links Calculated Properties Human Pathways

External database links:

PubChem CID:	448209
CHEBI ID:	16556
HMDB ID:	HMDB0001176
KEGG ID:	C00128
Chemspider ID:	395082
METLIN ID:	6057
MetaCyc ID:	CMP-N-ACETYL-NEURAMINATE
EPA CompTox DB:	DTXCID901437354
Plant Metabolite Hub(Pmhub):	MS000016804

Calculated physicochemical properties (?):

Heavy Atoms:	41
Rings:	3
Aromatic Rings:	1
Rotatable Bonds:	11
van der Waals Molecular volume:	497.85 Å3 molecule-1
Toplogical Polar Sufrace Area:	327.05 Å2 molecule-1
Hydrogen Bond Donors:	10
Hydrogen Bond Acceptors:	18
logP:	-1.05
Molar Refractivity:	133.82
Fraction sp3 Carbons:	0.70
sp3 Carbons:	14

Human Pathway links:

HMDB and KEGG pathways containing this metabolite

REACTOME pathways containing this metabolite

References

LIPID MAPS classification: "Update of the LIPID MAPS comprehensive classification system for lipids", Fahy E, Subramaniam S, Murphy RC, Nishijima M, Raetz CR, Shimizu T, Spener F, van Meer G, Wakelam MJ, and Dennis EA, J. Lipid Res. (2009) 50: S9-S14. DOI: 10.1194/jlr.R800095-JLR200
ClassyFire classification: "ClassyFire: automated chemical classification with a comprehensive, computable taxonomy", Djoumbou Feunang Y, Eisner R, Knox C, Chepelev L, Hastings J, Owen G, Fahy E, Steinbeck C, Subramanian S, Bolton E, Greiner R, and Wishart DS, J. Cheminformatics (2016) 8:61. DOI: 10.1186/s13321-016-0174-y