Metabolomics Structure Database

 
MW REGNO: 43246
Common Name:Cyclacillin
Systematic Name:(2S,5R,6R)-6-[(1-aminocyclohexane)amido]-3,3-dimethyl-7-oxo-4-thia-1-azabicyclo[3.2.0]heptane-2-carboxylic acid
RefMet Name:Cyclacillin
Synonyms: [PubChem Synonyms]
Exact Mass:
341.1409 (neutral)    Calculate m/z:
Formula:C15H23N3O4S
InChIKey:HGBLNBBNRORJKI-WCABBAIRSA-N
ClassyFire superclass:Organoheterocyclic compounds [C0000002]
ClassyFire class:Lactams [C0000160]
ClassyFire subclass:Beta lactams [C0000162]
ClassyFire direct parent:Penicillins [C0000174]
SMILES:CC1(C)[C@H](C(=O)O)N2C(=O)[C@H]([C@H]2S1)NC(=O)C1(CCCCC1)N
Studies:Available studies (via RefMet name)

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External database links:

PubChem CID:19003
CHEBI ID:31444
HMDB ID:HMDB0015135
KEGG ID:C12766
Chemspider ID:17941
EPA CompTox DB:DTXCID70202998
Plant Metabolite Hub(Pmhub):MS000023162

Calculated physicochemical properties (?):

Heavy Atoms: 23  
Rings: 3  
Aromatic Rings: 0  
Rotatable Bonds: 3  
van der Waals Molecular volume: 309.73 Å3 molecule-1  
Toplogical Polar Sufrace Area: 112.73 Å2 molecule-1  
Hydrogen Bond Donors: 3  
Hydrogen Bond Acceptors: 5  
logP: 1.71  
Molar Refractivity: 88.22  
Fraction sp3 Carbons: 0.80  
sp3 Carbons: 12  

References

LIPID MAPS classification: "Update of the LIPID MAPS comprehensive classification system for lipids", Fahy E, Subramaniam S, Murphy RC, Nishijima M, Raetz CR, Shimizu T, Spener F, van Meer G, Wakelam MJ, and Dennis EA, J. Lipid Res. (2009) 50: S9-S14. DOI: 10.1194/jlr.R800095-JLR200
ClassyFire classification: "ClassyFire: automated chemical classification with a comprehensive, computable taxonomy", Djoumbou Feunang Y, Eisner R, Knox C, Chepelev L, Hastings J, Owen G, Fahy E, Steinbeck C, Subramanian S, Bolton E, Greiner R, and Wishart DS, J. Cheminformatics (2016) 8:61. DOI: 10.1186/s13321-016-0174-y

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