Metabolomics Structure Database

 
MW REGNO: 51114
Common Name:Daphnin
Systematic Name:7-(beta-D-glucopyranosyloxy)-8-hydroxy-2H-chromen-2-one
RefMet Name:Daphnin
Synonyms:7-(beta-D-glucopyranosyloxy)-8-hydroxycoumarin; 8-hydroxy-2-oxo-2H-chromen-7-yl beta-D-glucopyranoside; daphnin [PubChem Synonyms]
Exact Mass:
340.0794 (neutral)    Calculate m/z:
Formula:C15H16O9
InChIKey:HOIXTKAYCMNVMY-PVOAASPHSA-N
ClassyFire superclass:Phenylpropanoids and polyketides [C0000261]
ClassyFire class:Coumarins and derivatives [C0000145]
ClassyFire subclass:Coumarin glycosides [C0001743]
ClassyFire direct parent:Coumarin glycosides [C0001743]
SMILES:c1cc(c(c2c1ccc(=O)o2)O)O[C@H]1[C@@H]([C@H]([C@@H]([C@@H](CO)O1)O)O)O
Studies:Available studies (via RefMet name)

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External database links:

PubChem CID:439499
CHEBI ID:17989
MetaCyc ID:DAPHNIN
EPA CompTox DB:DTXCID70220430

Calculated physicochemical properties (?):

Heavy Atoms: 24  
Rings: 3  
Aromatic Rings: 2  
Rotatable Bonds: 3  
van der Waals Molecular volume: 275.09 Å3 molecule-1  
Toplogical Polar Sufrace Area: 151.89 Å2 molecule-1  
Hydrogen Bond Donors: 5  
Hydrogen Bond Acceptors: 9  
logP: 1.29  
Molar Refractivity: 81.70  
Fraction sp3 Carbons: 0.40  
sp3 Carbons: 6  

References

LIPID MAPS classification: "Update of the LIPID MAPS comprehensive classification system for lipids", Fahy E, Subramaniam S, Murphy RC, Nishijima M, Raetz CR, Shimizu T, Spener F, van Meer G, Wakelam MJ, and Dennis EA, J. Lipid Res. (2009) 50: S9-S14. DOI: 10.1194/jlr.R800095-JLR200
ClassyFire classification: "ClassyFire: automated chemical classification with a comprehensive, computable taxonomy", Djoumbou Feunang Y, Eisner R, Knox C, Chepelev L, Hastings J, Owen G, Fahy E, Steinbeck C, Subramanian S, Bolton E, Greiner R, and Wishart DS, J. Cheminformatics (2016) 8:61. DOI: 10.1186/s13321-016-0174-y

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