Metabolomics Structure Database

 
MW REGNO: 49893
Common Name:dADP
Systematic Name:2'-deoxyadenosine 5'-diphosphate
RefMet Name:dADP
Synonyms:deoxy-ADP; 2'-deoxy-ADP [PubChem Synonyms]
Exact Mass:
411.0345 (neutral)    Calculate m/z:
Formula:C10H15N5O9P2
InChIKey:DAEAPNUQQAICNR-RRKCRQDMSA-N
ClassyFire superclass:Nucleosides, nucleotides, and analogues [C0000289]
ClassyFire class:Purine nucleotides [C0001506]
ClassyFire subclass:Purine deoxyribonucleotides [C0002134]
ClassyFire direct parent:Purine 2'-deoxyribonucleoside diphosphates [C0002139]
Massbank MS spectra:View MS spectra
NP-MRD NMR spectra:View NMR spectra
SMILES:C1[C@@H]([C@@H](COP(=O)(O)OP(=O)(O)O)O[C@H]1n1cnc2c(N)ncnc12)O
Studies:Available studies (via RefMet name)

Select appropriate tab below to view additional details:

Calculated physicochemical properties (?):

Heavy Atoms: 26  
Rings: 3  
Aromatic Rings: 2  
Rotatable Bonds: 6  
van der Waals Molecular volume: 285.89 Å3 molecule-1  
Toplogical Polar Sufrace Area: 214.44 Å2 molecule-1  
Hydrogen Bond Donors: 5  
Hydrogen Bond Acceptors: 13  
logP: 0.65  
Molar Refractivity: 84.28  
Fraction sp3 Carbons: 0.50  
sp3 Carbons: 5  

References

LIPID MAPS classification: "Update of the LIPID MAPS comprehensive classification system for lipids", Fahy E, Subramaniam S, Murphy RC, Nishijima M, Raetz CR, Shimizu T, Spener F, van Meer G, Wakelam MJ, and Dennis EA, J. Lipid Res. (2009) 50: S9-S14. DOI: 10.1194/jlr.R800095-JLR200
ClassyFire classification: "ClassyFire: automated chemical classification with a comprehensive, computable taxonomy", Djoumbou Feunang Y, Eisner R, Knox C, Chepelev L, Hastings J, Owen G, Fahy E, Steinbeck C, Subramanian S, Bolton E, Greiner R, and Wishart DS, J. Cheminformatics (2016) 8:61. DOI: 10.1186/s13321-016-0174-y

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