Metabolomics Structure Database

 
MW REGNO: 37553
Common Name:UDP-D-Xylose
Systematic Name:{[(2R,3S,4R)-5-(2,4-dioxo-1,2,3,4-tetrahydropyrimidin-1-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}({[hydroxy({[(3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxy})phosphoryl]oxy})phosphinic acid
RefMet Name:UDP-D-Xylose
Synonyms:UDP-Xylose [PubChem Synonyms]
Exact Mass:
536.0445 (neutral)    Calculate m/z:
Formula:C14H22N2O16P2
InChIKey:DQQDLYVHOTZLOR-WZNRFRBMSA-N
ClassyFire superclass:Nucleosides, nucleotides, and analogues [C0000289]
ClassyFire class:Pyrimidine nucleotides [C0001509]
ClassyFire subclass:Pyrimidine ribonucleotides [C0002147]
ClassyFire direct parent:Pyrimidine ribonucleoside diphosphates [C0001621]
SMILES:c1cn([C@H]2[C@@H]([C@@H]([C@@H](COP(=O)(O)OP(=O)(O)OC3[C@@H]([C@H]([C@@H](CO3)O)O)O)O2)O)O)c(=O)[nH]c1=O
Studies:Available studies (via RefMet name)

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External database links:

PubChem CID:11857306
CHEBI ID:16082
HMDB ID:HMDB0001018
KEGG ID:C00190
Chemspider ID:388324
METLIN ID:5948
MetaCyc ID:UDP-D-XYLOSE
Plant Metabolite Hub(Pmhub):MS000010046

References

LIPID MAPS classification: "Update of the LIPID MAPS comprehensive classification system for lipids", Fahy E, Subramaniam S, Murphy RC, Nishijima M, Raetz CR, Shimizu T, Spener F, van Meer G, Wakelam MJ, and Dennis EA, J. Lipid Res. (2009) 50: S9-S14. DOI: 10.1194/jlr.R800095-JLR200
ClassyFire classification: "ClassyFire: automated chemical classification with a comprehensive, computable taxonomy", Djoumbou Feunang Y, Eisner R, Knox C, Chepelev L, Hastings J, Owen G, Fahy E, Steinbeck C, Subramanian S, Bolton E, Greiner R, and Wishart DS, J. Cheminformatics (2016) 8:61. DOI: 10.1186/s13321-016-0174-y

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