List of human metabolic pathways and metabolites

Pathway name (# of metabolites detected in this study)HMDB pathwayKEGG pathway
Alanine Metabolism SMP00055 map00250
Amino Sugar Metabolism SMP00045 map00520
Ammonia Recycling SMP00009 map00910
Arginine and Proline Metabolism SMP00020 map00330
Aspartate Metabolism SMP00067 map00250
Betaine Metabolism SMP00123 map00260
Beta Oxidation of Very Long Chain Fatty Acids SMP00052 map01040
Bile Acid Biosynthesis SMP00035 map00120
Biotin Metabolism SMP00066 map00780
Butyrate Metabolism SMP00073 map00650
Citric Acid Cycle SMP00057 map00020
Cysteine Metabolism SMP00013 map00270
Ethanol Degradation SMP00449 -
Fatty acid Metabolism SMP00051 map00071
Folate Metabolism SMP00053 map00670
Fructose and Mannose Degradation SMP00064 map00051
Galactose Metabolism SMP00043 map00052
Gluconeogenesis SMP00128 map00010
Glutamate Metabolism SMP00072 map00250
Glutathione Metabolism SMP00015 map00480
Glycerolipid Metabolism SMP00039 map00561
Glycine and Serine Metabolism SMP00004 map00260
Glycolysis SMP00040 map00010
Histidine Metabolism SMP00044 map00340
Inositol Metabolism SMP00011 map00562
Inositol Phosphate Metabolism SMP00462 map00562
Lactose Degradation SMP00457 -
Lactose Synthesis SMP00444 -
Methionine Metabolism SMP00033 map00270
Mitochondrial Beta-Oxidation of Long Chain Saturated Fatty Acids SMP00482 -
Mitochondrial Beta-Oxidation of Medium Chain Saturated Fatty Acids SMP00481 -
Mitochondrial Beta-Oxidation of Short Chain Saturated Fatty Acids SMP00480 -
Mitochondrial Electron Transport Chain SMP00355 map00190
Nicotinate and Nicotinamide Metabolism SMP00048 map00760
Nucleotide Sugars Metabolism SMP00010 map00520
Oxidation of Branched Chain Fatty Acids SMP00030 -
Pantothenate and CoA Biosynthesis SMP00027 map00770
Pentose Phosphate Pathway SMP00031 map00030
Phenylacetate Metabolism SMP00126 map00360
Phenylalanine and Tyrosine Metabolism SMP00008 map00360
Phosphatidylinositol Phosphate Metabolism SMP00463 map00562
Phytanic Acid Peroxisomal Oxidation SMP00450 -
Propanoate Metabolism SMP00016 map00640
Purine Metabolism SMP00050 map00230
Pyrimidine Metabolism SMP00046 map00240
Pyruvate Metabolism SMP00060 map00620
Riboflavin Metabolism SMP00070 map00740
Selenoamino Acid Metabolism SMP00029 map00450
Spermidine and Spermine Biosynthesis SMP00445 -
Sphingolipid Metabolism SMP00034 map00600
Starch and Sucrose Metabolism SMP00058 map00500
Steroid Biosynthesis SMP00023 map00100
Sulfate/Sulfite Metabolism SMP00041 map00920
Thiamine Metabolism SMP00076 map00730
Threonine and 2-Oxobutanoate Degradation SMP00452 -
Transfer of Acetyl Groups into Mitochondria SMP00466 -
Trehalose Degradation SMP00467 -
Tryptophan Metabolism SMP00063 map00380
Urea Cycle SMP00059 map00330
Valine, Leucine and Isoleucine Degradation SMP00032 map00280
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