ST001000 Gut microbiome structure and metabolic activity in inflammatory bowel disease
List of human metabolic pathways and metabolites

Pathway name (# of metabolites detected in this study)HMDB pathwayKEGG pathway
Alanine Metabolism (5) SMP00055 map00250
Alpha Linolenic Acid and Linoleic Acid Metabolism (4) SMP00018 map00592
Amino Sugar Metabolism (4) SMP00045 map00520
Ammonia Recycling (12) SMP00009 map00910
Arachidonic Acid Metabolism (4) SMP00075 map00590
Arginine and Proline Metabolism (14) SMP00020 map00330
Aspartate Metabolism (14) SMP00067 map00250
Beta-Alanine Metabolism (10) SMP00007 map00410
Betaine Metabolism (4) SMP00123 map00260
Bile Acid Biosynthesis (15) SMP00035 map00120
Biotin Metabolism (1) SMP00066 map00780
Butyrate Metabolism (1) SMP00073 map00650
Caffeine Metabolism (2) SMP00028 map00232
Carnitine Synthesis (5) SMP00465 -
Catecholamine Biosynthesis (3) SMP00012 map00350
Citric Acid Cycle (4) SMP00057 map00020
Cysteine Metabolism (3) SMP00013 map00270
Fatty Acid Biosynthesis (5) SMP00456 -
Fatty Acid Elongation In Mitochondria (1) SMP00054 map00062
Fatty acid Metabolism (2) SMP00051 map00071
Folate Metabolism (2) SMP00053 map00670
Fructose and Mannose Degradation (2) SMP00064 map00051
Galactose Metabolism (1) SMP00043 map00052
Gluconeogenesis (2) SMP00128 map00010
Glucose-Alanine Cycle (5) SMP00127 -
Glutamate Metabolism (9) SMP00072 map00250
Glutathione Metabolism (5) SMP00015 map00480
Glycerolipid Metabolism (67) SMP00039 map00561
Glycine and Serine Metabolism (14) SMP00004 map00260
Histidine Metabolism (8) SMP00044 map00340
Homocysteine Degradation (2) SMP00455 -
Ketone Body Metabolism (1) SMP00071 map00072
Lysine Degradation (5) SMP00037 map00310
Malate-Aspartate Shuttle (4) SMP00129 -
Methionine Metabolism (7) SMP00033 map00270
Mitochondrial Beta-Oxidation of Long Chain Saturated Fatty Acids (1) SMP00482 -
Mitochondrial Beta-Oxidation of Short Chain Saturated Fatty Acids (1) SMP00480 -
Mitochondrial Electron Transport Chain (2) SMP00355 map00190
Nicotinate and Nicotinamide Metabolism (7) SMP00048 map00760
Oxidation of Branched Chain Fatty Acids (3) SMP00030 -
Phenylacetate Metabolism (2) SMP00126 map00360
Phenylalanine and Tyrosine Metabolism (8) SMP00008 map00360
Phospholipid Biosynthesis (28) SMP00025 map00564
Phytanic Acid Peroxisomal Oxidation (3) SMP00450 -
Plasmalogen Synthesis (1) SMP00479 -
Porphyrin Metabolism (1) SMP00024 map00860
Propanoate Metabolism (7) SMP00016 map00640
Purine Metabolism (18) SMP00050 map00230
Pyrimidine Metabolism (7) SMP00046 map00240
Pyruvate Metabolism (1) SMP00060 map00620
Riboflavin Metabolism (1) SMP00070 map00740
Selenoamino Acid Metabolism (4) SMP00029 map00450
Spermidine and Spermine Biosynthesis (4) SMP00445 -
Sphingolipid Metabolism (8) SMP00034 map00600
Steroid Biosynthesis (5) SMP00023 map00100
Steroidogenesis (1) SMP00130 map00140
Taurine and Hypotaurine Metabolism (2) SMP00021 map00430
Thiamine Metabolism (1) SMP00076 map00730
Threonine and 2-Oxobutanoate Degradation (2) SMP00452 -
Transfer of Acetyl Groups into Mitochondria (1) SMP00466 -
Tryptophan Metabolism (8) SMP00063 map00380
Tyrosine Metabolism (11) SMP00006 map00350
Urea Cycle (14) SMP00059 map00330
Valine, Leucine and Isoleucine Degradation (10) SMP00032 map00280
Vitamin B6 Metabolism (2) SMP00017 map00750
Vitamin K Metabolism (1) SMP00464 -
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