ST002075 Profiling of the human intestinal microbiome and bile acids under physiologic conditions using an ingestible sampling device (Part 2)
List of human metabolic pathways and metabolites

Pathway name (# of metabolites detected in this study)HMDB pathwayKEGG pathway
Alanine Metabolism (2) SMP00055 map00250
Alpha Linolenic Acid and Linoleic Acid Metabolism (1) SMP00018 map00592
Amino Sugar Metabolism (2) SMP00045 map00520
Ammonia Recycling (4) SMP00009 map00910
Arginine and Proline Metabolism (4) SMP00020 map00330
Aspartate Metabolism (2) SMP00067 map00250
Betaine Metabolism (4) SMP00123 map00260
Bile Acid Biosynthesis (1) SMP00035 map00120
Biotin Metabolism (1) SMP00066 map00780
Caffeine Metabolism (4) SMP00028 map00232
Carnitine Synthesis (3) SMP00465 -
Catecholamine Biosynthesis (2) SMP00012 map00350
Citric Acid Cycle (1) SMP00057 map00020
Fatty Acid Biosynthesis (1) SMP00456 -
Fatty acid Metabolism (1) SMP00051 map00071
Gluconeogenesis (1) SMP00128 map00010
Glutamate Metabolism (2) SMP00072 map00250
Glutathione Metabolism (2) SMP00015 map00480
Glycine and Serine Metabolism (7) SMP00004 map00260
Histidine Metabolism (4) SMP00044 map00340
Homocysteine Degradation (1) SMP00455 -
Lysine Degradation (2) SMP00037 map00310
Methionine Metabolism (9) SMP00033 map00270
Nicotinate and Nicotinamide Metabolism (5) SMP00048 map00760
Pantothenate and CoA Biosynthesis (1) SMP00027 map00770
Phenylalanine and Tyrosine Metabolism (2) SMP00008 map00360
Phospholipid Biosynthesis (7) SMP00025 map00564
Porphyrin Metabolism (1) SMP00024 map00860
Propanoate Metabolism (2) SMP00016 map00640
Purine Metabolism (4) SMP00050 map00230
Pyrimidine Metabolism (2) SMP00046 map00240
Pyruvate Metabolism (1) SMP00060 map00620
Retinol Metabolism (1) SMP00074 map00830
Riboflavin Metabolism (1) SMP00070 map00740
Spermidine and Spermine Biosynthesis (4) SMP00445 -
Sphingolipid Metabolism (1) SMP00034 map00600
Thiamine Metabolism (1) SMP00076 map00730
Threonine and 2-Oxobutanoate Degradation (1) SMP00452 -
Transfer of Acetyl Groups into Mitochondria (1) SMP00466 -
Tryptophan Metabolism (5) SMP00063 map00380
Tyrosine Metabolism (2) SMP00006 map00350
Ubiquinone Biosynthesis (1) SMP00065 map00130
Urea Cycle (1) SMP00059 map00330
Valine, Leucine and Isoleucine Degradation (4) SMP00032 map00280
Vitamin B6 Metabolism (1) SMP00017 map00750
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