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ST002075 Profiling of the human intestinal microbiome and bile acids under physiologic conditions using an ingestible sampling device (Part 2)List of human metabolic pathways and metabolites
Pathway name (# of metabolites detected in this study)
HMDB pathway
KEGG pathway
Alanine Metabolism (2)
SMP00055
map00250
Alpha Linolenic Acid and Linoleic Acid Metabolism (1)
SMP00018
map00592
Amino Sugar Metabolism (2)
SMP00045
map00520
Ammonia Recycling (4)
SMP00009
map00910
Arginine and Proline Metabolism (4)
SMP00020
map00330
Aspartate Metabolism (2)
SMP00067
map00250
Betaine Metabolism (4)
SMP00123
map00260
Bile Acid Biosynthesis (1)
SMP00035
map00120
Biotin Metabolism (1)
SMP00066
map00780
Caffeine Metabolism (4)
SMP00028
map00232
Carnitine Synthesis (3)
SMP00465
-
Catecholamine Biosynthesis (2)
SMP00012
map00350
Citric Acid Cycle (1)
SMP00057
map00020
Fatty Acid Biosynthesis (1)
SMP00456
-
Fatty acid Metabolism (1)
SMP00051
map00071
Gluconeogenesis (1)
SMP00128
map00010
Glutamate Metabolism (2)
SMP00072
map00250
Glutathione Metabolism (2)
SMP00015
map00480
Glycine and Serine Metabolism (7)
SMP00004
map00260
Histidine Metabolism (4)
SMP00044
map00340
Homocysteine Degradation (1)
SMP00455
-
Lysine Degradation (2)
SMP00037
map00310
Methionine Metabolism (9)
SMP00033
map00270
Nicotinate and Nicotinamide Metabolism (5)
SMP00048
map00760
Pantothenate and CoA Biosynthesis (1)
SMP00027
map00770
Phenylalanine and Tyrosine Metabolism (2)
SMP00008
map00360
Phospholipid Biosynthesis (7)
SMP00025
map00564
Porphyrin Metabolism (1)
SMP00024
map00860
Propanoate Metabolism (2)
SMP00016
map00640
Purine Metabolism (4)
SMP00050
map00230
Pyrimidine Metabolism (2)
SMP00046
map00240
Pyruvate Metabolism (1)
SMP00060
map00620
Retinol Metabolism (1)
SMP00074
map00830
Riboflavin Metabolism (1)
SMP00070
map00740
Spermidine and Spermine Biosynthesis (4)
SMP00445
-
Sphingolipid Metabolism (1)
SMP00034
map00600
Thiamine Metabolism (1)
SMP00076
map00730
Threonine and 2-Oxobutanoate Degradation (1)
SMP00452
-
Transfer of Acetyl Groups into Mitochondria (1)
SMP00466
-
Tryptophan Metabolism (5)
SMP00063
map00380
Tyrosine Metabolism (2)
SMP00006
map00350
Ubiquinone Biosynthesis (1)
SMP00065
map00130
Urea Cycle (1)
SMP00059
map00330
Valine, Leucine and Isoleucine Degradation (4)
SMP00032
map00280
Vitamin B6 Metabolism (1)
SMP00017
map00750
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