List of human metabolic pathways and metabolites (REACTOME)

Pathway name (# of metabolites detected in study)Reactome pathway
Abnormal metabolism in phenylketonuria REACT_121117
Amino acid synthesis and interconversion (transamination) REACT_238
Amino acid transport across the plasma membrane REACT_13796
Antigen Presentation: Folding, assembly and peptide loading of class I MHC REACT_75795
Antigen processing: Ubiquitination & Proteasome degradation REACT_75842
Cross-presentation of soluble exogenous antigens (endosomes) REACT_111056
Cytosolic tRNA aminoacylation REACT_15306
Endosomal/Vacuolar pathway REACT_111168
ER-Phagosome pathway REACT_111178
Glutathione synthesis and recycling REACT_6960
Glyoxylate metabolism REACT_16925
Mitochondrial iron-sulfur cluster biogenesis REACT_150353
Mitochondrial tRNA aminoacylation REACT_15302
Molybdenum cofactor biosynthesis REACT_25073
Na+/Cl- dependent neurotransmitter transporters REACT_20506
Phenylalanine and tyrosine catabolism REACT_1786
Proton-coupled neutral amino acid transporters REACT_19348
Proton/oligonucleotide cotransporters REACT_19328
Pyrimidine catabolism REACT_1023
Thyroxine biosynthesis REACT_15292
Tryptophan catabolism REACT_916
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