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Return to Statistics Toolbox
Volcano Plot analysis for Study ST000247
(Analysis All analyses used)
Select one or more experimental factors for Groups 1 and 2. The members of each group should be DIFFERENT.
Group1
Experimental factor
Group2
Strain:N/A | Sample type:Media Only (3)
Strain:nos complement | Sample type:Supernatant (3)
Strain:nos complement | Sample type:Whole Cells (3)
Strain:nos mutant | Sample type:Supernatant (3)
Strain:nos mutant | Sample type:Whole Cells (3)
Strain:nos SrrAB mutant nos complement | Sample type:Supernatant (3)
Strain:nos SrrAB mutant nos complement | Sample type:Whole Cells (3)
Strain:nos SrrAB mutant | Sample type:Supernatant (3)
Strain:nos SrrAB mutant | Sample type:Whole Cells (3)
Strain:SrrAB mutant | Sample type:Supernatant (3)
Strain:SrrAB mutant | Sample type:Whole Cells (3)
Strain:Wildtype | Sample type:Supernatant (3)
Strain:Wildtype | Sample type:Whole Cells (3)
P-value cutoff:
None
0.1
0.02
0.05
0.01
0.005
0.002
0.001
0.0005
0.0002
Fold-change cutoff:
None
1.1
1.2
1.25
1.33
1.5
2
3
4
5
Sample normalization:
None
Mean
Sum
Group by metabolite classification:
Sub class
Main class
Use:
Submitted metabolite names
RefMet names
Maximum # of (most significant) metabolites per class to use in pvalue group calculation:
1
3
5
10
20
All
Analysis:
ESI positive ion mode Organic Acids (Instrument:Thermo Scientific Quantiva)
ESI positive ion mode NAD/NADH(Instrument:Thermo Scientific Quantiva)
ESI positive ion mode ATP(Instrument:Thermo Scientific Quantiva)
ESI positive ion mode Amino Acids(Instrument:Agilent 6490)
Combine data for all analyses?:
Metabolomics Workbench
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