Metabolomics Workbench : NIH Data Repository

Clustering data with hclust algorithm for (Study ST000117)

GCMS positive ion mode (Analysis AN000198)

Metabolite	Structure	F1	F2	F3
glycolic acid	ME681199	1.01	0.90	1.09
lactic acid	ME681196	1.36	0.98	0.66
alanine	ME681255	0.86	0.98	1.16
mannose-6-phosphate NIST	ME681268	0.41	1.05	1.54
2-hydroxyhexanoic acid	ME681280	1.52	1.12	0.36
cholesterol	ME681258	0.91	1.31	0.78
fumaric acid	ME681274	1.10	1.01	0.90
glutamine	ME681219	1.25	0.60	1.16
adenosine	ME681202	1.23	0.93	0.84
cysteine-glycine	ME681222	0.75	1.60	0.65
fructose-1,6-bisphosphate	ME681275	0.73	1.00	1.26
lauric acid	ME681217	0.79	1.05	1.16
lysine	ME681216	0.94	1.17	0.89
fructose-6-phosphate	ME681257	0.62	0.97	1.41
glyceric acid	ME681245	1.08	1.41	0.51
benzoic acid	ME681200	1.00	0.93	1.07
cytosin	ME681221	0.78	0.89	1.33
glutamic acid	ME681246	0.72	1.14	1.14
glucose-1-phosphate	ME681273	0.80	1.16	1.04
hexose-6-phosphate	ME681251	0.58	0.98	1.44
levoglucosan	ME681242	0.99	0.98	1.03
heptadecanoic acid	ME681198	0.78	0.90	1.32
isoleucine	ME681197	1.09	1.22	0.69
glucose	ME681188	0.17	1.00	1.84
fructose	ME681220	0.82	1.01	1.17
inosine	ME681243	0.92	1.15	0.93
2-hydroxyglutaric acid	ME681228	1.68	0.96	0.35
adenine	ME681203	1.21	0.89	0.90
inosine-5^-monophosphate	ME681260	1.01	1.51	0.48
glucose-6-phosphate	ME681247	0.62	0.96	1.42
aspartic acid	ME681225	1.40	0.53	1.08
hypoxanthine	ME681244	1.00	1.05	0.95
citric acid	ME681277	0.71	0.69	1.60
guanine	ME681254	0.99	0.94	1.07
cytidine-5-monophosphate	ME681276	0.84	1.03	1.13
alpha-ketoglutarate	ME681226	0.81	1.66	0.54
beta-alanine	ME681224	1.17	1.22	0.61
2^-deoxyguanosine	ME681281	1.07	1.03	0.90
glutathione	ME681272	0.39	0.81	1.80
2,5-dihydroxypyrazine NIST	ME681204	1.15	0.73	1.12
fructose-1-phosphate	ME681248	0.75	0.95	1.30
glycerol-alpha-phosphate	ME681271	0.86	1.01	1.12
2-isopropylmalic acid	ME681279	1.47	1.05	0.48
guanosine	ME681270	0.98	1.07	0.95
adenosine-5-monophosphate	ME681201	0.98	1.05	0.97
glycine	ME681218	0.69	1.67	0.64
hydroxylamine	ME681256	0.99	1.04	0.97
alanine-alanine	ME681278	1.44	0.87	0.69
3-phosphoglycerate	ME681227	0.90	1.43	0.66
hexose NIST	ME681269	0.21	1.13	1.66
cysteine	ME681223	0.52	2.23	0.24
malic acid	ME681195	0.95	1.21	0.85

Factors:

F1	genotype:single RidA knockout
F2	genotype:triple RidA knockout
F3	genotype:Wild Type

Data matrix