Metabolomics Workbench : NIH Data Repository

Clustering data with hclust algorithm for (Study ST001289)

Several methods (Analysis AN002142)

Metabolite	Structure	F1	F2	F3	F4
Cer(d18:1/24:0)	ME301908	1.42	0.92	0.84	0.82
PC(P-36:2)/PC(O-36:3)	ME302005	1.08	0.98	0.90	1.04
PG(40:5)	ME302047	0.99	0.92	0.70	1.38
Cer(d18:0/18:0)	ME301897	1.51	0.94	0.79	0.75
PC(38:2)	ME301994	1.05	0.83	1.08	1.04
Sphingosine-1-phosphate	ME302114	0.97	1.00	1.09	0.95
Margaric acid	ME301959	1.66	0.73	1.09	0.52
PC(38:4)	ME301996	1.04	1.02	0.74	1.20
Cer(d18:0/16:0)	ME301896	1.46	0.80	1.08	0.67
CL(74:7)	ME301927	0.48	1.64	0.53	1.35
PC(P-36:0)/PC(O-36:1)	ME302003	1.20	0.66	1.34	0.80
PC(P-36:1)/PC(O-36:2)	ME302004	1.18	0.75	1.18	0.89
CE(20:2)	ME301892	1.92	0.84	1.11	0.14
PC(P-36:4)/PC(O-36:5)	ME302007	1.30	0.97	0.93	0.80
PE(32:0)	ME302012	1.07	1.03	0.88	1.02
PS(34:2)	ME302077	1.01	0.93	1.03	1.03
PE(34:1)	ME302016	1.15	0.89	1.08	0.89
20-HETE	ME301860	1.07	1.16	0.77	1.00
PI(36:4)	ME302060	1.05	1.15	0.81	1.00
PC(P-38:2)/PC(O-38:3)	ME302009	0.97	0.91	1.04	1.08
SM(d18:1/18:0)	ME302104	1.13	0.95	1.01	0.92
PG(36:2)	ME302040	1.30	0.68	1.26	0.75
PC(P-38:1)/PC(O-38:2)	ME302008	1.06	0.74	1.25	0.95
PG(38:2)	ME302042	1.70	0.51	0.93	0.85
PC(38:5)	ME301997	1.21	0.92	1.00	0.87
PG(36:3)	ME302041	1.27	0.93	0.80	1.00
Zymosterol	ME302119	3.13	0.38	0.15	0.17
13Z,16Z-Docosadienoic acid	ME301854	0.56	1.95	0.35	1.14
5-HETE	ME301868	0.53	0.92	1.80	0.76
PE(36:1)	ME302018	1.14	0.98	0.89	0.99
Cer(d18:0/24:0)	ME301900	1.65	0.78	1.03	0.53
PA(40:4)	ME301977	0.48	1.61	0.48	1.44
12-HETE	ME301851	0.54	1.87	0.63	0.96
PG(40:8)	ME302050	1.56	0.92	0.52	1.00
Nervonic acid	ME301961	1.55	1.02	0.82	0.61
7,10,13,16,19-Docosapentaenoic acid	ME301869	1.81	0.62	1.24	0.33
PG(40:4)	ME302046	1.36	1.66	0.39	0.81
7alpha-Hydroxy-cholesterol	ME301870	1.76	0.89	0.84	0.51
PS(32:0)	ME302073	0.69	1.22	0.81	1.29
PI(38:3)	ME302064	1.16	0.77	1.31	0.76
EPA	ME301936	2.68	0.29	0.92	0.12
SM(d18:1/22:0)	ME302106	1.24	0.98	0.91	0.87
Oleic acid	ME301962	1.13	0.96	1.08	0.83
PE(36:3)	ME302020	1.12	0.94	0.95	0.99
24,25-Epoxycholesterol	ME301862	1.39	1.26	0.32	1.04
SM(d18:0/16:0)	ME302095	1.10	0.97	0.96	0.98
10Z-Heptadecenoic acid	ME301847	2.24	0.38	1.24	0.14
Coenzyme Q9	ME301930	0.53	1.37	0.94	1.16
PA(36:2)	ME301970	0.77	0.97	0.94	1.33
PS(32:1)	ME302074	1.31	0.67	1.41	0.61
PE(36:4)	ME302021	1.15	0.98	0.89	0.97
PS(36:3)	ME302081	1.14	0.79	1.24	0.84
GlcCer(d18:0/20:0)	ME301940	0.71	0.73	1.89	0.68
PA(34:1)	ME301966	1.00	0.80	1.08	1.12
PI(38:4)	ME302065	0.96	1.09	0.89	1.06
Cer(d18:1/26:0)	ME301910	1.31	0.83	0.99	0.87
PS(38:2)	ME302085	0.73	1.04	1.13	1.10
PE(P-36:4)/PE(O-36:5)	ME302033	0.86	1.08	0.96	1.10
Cholesterol	ME301914	1.99	0.78	0.62	0.61
GlcCer(d18:0/24:0)	ME301942	1.48	0.23	1.05	0.95
PA(36:1)	ME301969	0.98	0.93	0.94	1.15
CL(72:7)	ME301924	0.72	1.23	0.65	1.40
PG(34:2)	ME302038	2.47	0.40	0.69	0.44
PC(36:3)	ME301992	1.02	1.08	0.75	1.15
SM(d18:0/22:0)	ME302098	1.29	0.95	0.86	0.90
PC(32:2)	ME301984	1.54	0.60	1.25	0.60
PC(32:1)	ME301983	1.45	0.77	1.15	0.63
gamma-Linolenic acid	ME301937	1.68	0.87	0.91	0.53
PC(38:6)	ME301998	1.28	0.96	0.93	0.83
GlcCer(d18:0/26:1)	ME301945	0.52	0.96	1.13	1.26
PS(40:6)	ME302093	1.00	0.96	1.21	0.83
CL(74:8)	ME301928	0.76	1.12	0.73	1.39
15-Deoxy-delta-12,14-PGD2	ME301856	1.35	0.98	0.67	1.00
PC(40:5)	ME302001	0.90	0.94	0.94	1.23
PE(34:2)	ME302017	1.17	0.92	0.94	0.97
Arachidonic acid	ME301878	0.98	1.12	1.04	0.86
CE(16:1)	ME301885	2.32	0.28	1.35	0.05
CL(68:5)	ME301917	1.13	NA	0.94	0.35
PI(40:7)	ME302072	1.01	0.84	1.36	0.80
Lauric acid	ME301955	1.93	0.37	1.11	0.59
SM(d18:0/26:1)	ME302102	0.94	1.10	0.87	1.09
PA(34:0)	ME301965	1.04	0.97	0.65	1.35
PGE2	ME302052	0.25	1.95	1.05	0.75
Dolichol-19	ME301934	1.10	0.92	1.18	0.79
11Z,14Z-Eicosadienoic acid	ME301850	0.65	1.80	0.40	1.16
15S-HETE	ME301858	0.17	1.20	1.87	0.75
PGJ2	ME302053	1.14	1.30	0.30	1.27
4beta-Hydroxy-cholesterol	ME301866	0.90	1.12	0.94	1.03
PA(32:0)	ME301963	0.89	1.05	0.73	1.33
Linoleic acid	ME301957	1.03	1.43	0.61	0.93
PG(38:4)	ME302044	1.80	0.68	0.79	0.74
CL(72:6)	ME301923	1.13	0.87	1.08	0.92
Lanosterol	ME301954	1.89	0.63	0.89	0.79
PG(40:6)	ME302048	1.43	0.76	0.85	0.96
Sphingosine	ME302113	1.18	0.88	1.14	0.79
SM(d18:1/24:1)	ME302108	0.98	1.11	0.88	1.03
PS(36:1)	ME302079	0.95	1.04	1.00	1.02
PS(36:0)	ME302078	0.80	1.03	1.25	0.92
11(12)-EpETE	ME301848	0.69	1.09	NA	1.22
8-HETE	ME301874	0.68	0.97	1.84	0.51
PS(38:5)	ME302088	1.18	0.75	1.34	0.73
14(15)-EpETE	ME301855	0.75	0.91	NA	1.31
SM(d18:1/26:0)	ME302109	0.97	1.10	0.84	1.09
Cer(d18:0/20:0)	ME301898	1.50	1.13	0.72	0.64
PC(36:2)	ME301991	0.44	1.08	1.19	1.28
Palmitic acid	ME301980	1.44	0.82	1.13	0.61
PI(34:2)	ME302055	0.97	1.01	1.01	1.01
SM(d18:0/24:1)	ME302100	1.10	1.03	0.87	1.00
PI(36:2)	ME302058	0.81	1.16	0.91	1.12
PS(38:3)	ME302086	0.94	1.03	1.11	0.93
27-Hydroxycholesterol	ME301865	1.40	0.87	0.68	0.83
GlcCer(d18:1/20:0)	ME301948	0.90	1.15	1.06	0.89
PI(34:1)	ME302054	1.07	0.89	1.16	0.88
GlcCer(d18:1/22:0)	ME301949	1.03	1.02	1.03	0.91
PC(40:6)	ME302002	1.25	0.81	1.12	0.82
Cer(d18:1/24:1)	ME301909	1.10	0.94	0.99	0.96
CE(18:1)	ME301888	2.09	0.54	1.28	0.09
PS(40:2)	ME302089	0.78	1.05	1.29	0.87
PI(40:6)	ME302071	1.08	0.85	1.26	0.81
Stearidonic acid	ME302116	1.97	0.47	1.08	0.42
CE(16:2)	ME301886	2.33	0.18	1.47	0.02
PI(40:5)	ME302070	0.93	0.90	1.22	0.95
24S-Hydroxycholesterol	ME301863	3.15	0.35	0.20	0.13
PC(34:3)	ME301988	1.28	0.92	0.92	0.89
Dolichol-20	ME301935	1.01	1.01	1.16	0.82
PE(P-38:1)/PE(O-38:2)	ME302034	1.21	0.70	1.29	0.79
PS(36:2)	ME302080	0.80	1.14	0.81	1.26
Cer(d18:1/18:0)	ME301905	1.27	1.01	0.74	0.98
SM(d18:1/26:1)	ME302110	0.98	1.10	0.85	1.07
GlcCer(d18:1/24:0)	ME301950	1.03	1.11	0.93	0.92
PA(36:3)	ME301971	1.00	0.78	1.08	1.14
CE(20:1)	ME301891	1.90	0.63	1.35	0.12
PA(36:4)	ME301972	0.85	1.10	0.92	1.13
25-Hydroxycholesterol	ME301864	1.62	0.76	0.68	0.38
PG(36:1)	ME302039	2.14	0.37	0.84	0.66
CE(22:1)	ME301894	1.96	0.57	1.38	0.09
PA(38:4)	ME301975	0.86	1.18	0.79	1.17
CL(70:6)	ME301920	1.34	0.71	1.16	0.79
PG(38:5)	ME302045	1.61	0.96	0.55	0.87
PI(36:5)	ME302061	1.35	0.66	1.33	0.66
PGD2	ME302051	0.33	1.37	1.56	0.74
PA(36:0)	ME301968	0.86	0.90	1.23	1.02
Cholestenone	ME301913	2.39	NA	0.89	0.79
PS(40:4)	ME302091	0.34	1.80	0.47	1.39
PE(P-38:2)/PE(O-38:3)	ME302035	1.03	0.86	1.17	0.94
LTE4	ME301958	1.22	0.82	1.01	0.95
PI(36:0)	ME302056	1.05	0.83	1.28	0.84
PC(P-38:4)/PC(O-38:5)	ME302010	1.11	1.03	0.84	1.02
11-HETE	ME301849	0.70	1.30	1.08	0.92
PA(38:2)	ME301973	0.81	0.89	1.21	1.09
Sphinganine-1-phosphate	ME302112	1.04	0.95	1.20	0.80
SM(d18:0/18:0)	ME302096	1.12	0.90	1.04	0.94
Dolichol-18	ME301933	1.25	0.86	1.17	0.72
TXB2	ME302118	0.37	0.95	1.55	1.13
Cer(d18:0/24:1)	ME301901	1.55	0.76	1.08	0.61
Cer(d18:1/20:0)	ME301906	1.32	0.95	0.85	0.87
GlcCer(d18:1/16:0)	ME301946	0.94	1.04	1.04	0.98
PC(36:0)	ME301989	1.20	0.82	1.23	0.75
PS(38:1)	ME302084	0.98	1.01	1.01	1.01
Tricosanoic acid	ME302117	1.81	0.79	0.91	0.49
PS(36:4)	ME302082	0.99	1.07	0.89	1.05
GlcCer(d18:0/24:1)	ME301943	0.95	0.93	0.86	1.30
PI(38:6)	ME302067	1.30	0.75	1.30	0.65
CE(18:2)	ME301889	1.88	0.82	1.20	0.10
Myristic acid	ME301960	1.84	0.55	1.20	0.41
Arachidonoyl-EA	ME301879	1.00	1.18	0.91	0.91
CE(16:0)	ME301884	2.29	0.56	0.95	0.19
GlcCer(d18:0/26:0)	ME301944	1.64	0.28	1.03	0.36
PI(40:3)	ME302068	0.85	1.07	0.84	1.25
CL(72:8)	ME301925	0.43	1.43	0.35	1.79
GlcCer(d18:0/22:0)	ME301941	1.34	0.68	0.97	0.97
PE(P-36:0)/PE(O-36:1)	ME302029	1.27	0.66	1.32	0.75
PE(36:2)	ME302019	1.07	0.98	0.94	1.00
PE(32:2)	ME302014	1.49	0.59	1.33	0.59
Arachidic acid	ME301877	1.28	1.09	0.94	0.68
PC(36:1)	ME301990	1.22	0.94	1.02	0.81
Cer(d18:0/26:0)	ME301902	1.81	0.58	0.81	0.59
22R-Hydroxycholesterol	ME301861	1.31	0.69	1.27	0.63
PE(O-32:0)	ME302028	1.48	0.83	0.87	0.83
Desmosterol	ME301931	2.36	0.47	0.52	0.55
SM(d18:1/16:0)	ME302103	1.06	1.04	0.94	0.96
alpha-Linolenic acid	ME301876	1.40	1.16	0.74	0.70
GlcCer(d18:0/16:0)	ME301938	1.10	1.04	0.86	0.99
PS(34:1)	ME302076	1.03	0.91	1.10	0.96
PA(38:3)	ME301974	1.02	0.94	1.04	1.00
Cerotic acid	ME301912	1.44	1.01	0.81	0.74
Cer(d18:1/22:0)	ME301907	1.34	0.92	0.91	0.82
PS(40:7)	ME302094	1.17	0.68	1.55	0.60
SM(d18:0/24:0)	ME302099	1.20	1.02	0.87	0.91
PS(34:0)	ME302075	0.69	1.22	0.84	1.25
PC(40:4)	ME302000	0.62	1.19	0.70	1.49
PI(36:1)	ME302057	0.93	0.98	1.11	0.99
CE(20:4)	ME301893	1.30	1.16	1.45	0.09
PS(40:5)	ME302092	0.84	1.03	1.25	0.88
GlcCer(d18:1/26:1)	ME301953	0.80	1.08	1.00	1.12
PE(38:5)	ME302024	1.53	0.75	1.02	0.71
PC(34:1)	ME301986	1.17	0.97	0.92	0.95
PI(38:5)	ME302066	1.23	0.77	1.26	0.74
PS(38:0)	ME302083	0.84	1.00	1.25	0.91
PI(40:4)	ME302069	0.55	1.39	0.61	1.44
Lignoceric acid	ME301956	1.52	1.05	0.82	0.61
PA(32:1)	ME301964	1.66	0.57	1.23	0.53
PC(34:0)	ME301985	1.06	0.95	1.05	0.95
PE(38:3)	ME302022	1.06	1.06	0.80	1.08
PA(34:2)	ME301967	1.01	0.86	1.00	1.13
GlcCer(d18:0/18:0)	ME301939	0.66	1.17	1.46	0.87
PS(38:4)	ME302087	0.79	1.34	0.76	1.12
PC(32:0)	ME301982	0.99	1.10	0.85	1.06
15-Deoxy-delta-12,14-PGJ2	ME301857	1.89	1.90	0.10	0.11
PE(32:1)	ME302013	1.78	0.53	1.19	0.50
Bishomo-gamma-linolenic acid	ME301881	1.63	0.93	0.90	0.53
GlcCer(d18:1/26:0)	ME301952	0.91	0.98	0.92	1.19
PE(38:4)	ME302023	1.02	1.15	0.67	1.16
Cer(d18:0/22:0)	ME301899	1.72	0.89	0.78	0.60
CE(22:6)	ME301895	2.15	0.54	1.26	0.05
CL(74:9)	ME301929	0.66	1.30	0.56	1.48
Palmitoleic acid	ME301981	2.04	0.46	1.25	0.25
PC(38:3)	ME301995	0.98	1.05	0.86	1.11
PG(38:3)	ME302043	1.65	0.60	0.86	0.88
PC(P-38:5)/PC(O-38:6)	ME302011	1.47	0.76	1.06	0.72
SM(d18:0/20:0)	ME302097	1.13	1.01	0.93	0.93
12-Oxo-ETE	ME301852	0.81	1.11	NA	1.05
CE(14:0)	ME301882	2.88	0.12	0.77	0.02
Pentadecylic acid	ME302037	2.06	0.39	1.27	0.28
Stearic acid	ME302115	1.24	1.05	0.93	0.78
PA(40:5)	ME301978	1.03	1.02	1.05	0.90
PC(P-36:3)/PC(O-36:4)	ME302006	1.10	1.13	0.73	1.04
13,16,19-Docosatrienoic acid	ME301853	1.25	1.23	0.82	0.70
SM(d18:1/20:0)	ME302105	1.28	0.94	0.91	0.87
PA(40:3)	ME301976	0.69	1.26	0.68	1.37
Behenic acid	ME301880	1.61	1.00	0.85	0.55
CE(14:1)	ME301883	1.59	0.03	0.58	0.01
CL(68:4)	ME301916	0.95	NA	1.05	NA
CE(20:0)	ME301890	1.30	0.63	1.86	0.21
PE(40:6)	ME302027	1.30	0.93	0.85	0.91
CL(70:5)	ME301919	1.44	0.50	1.67	0.39
PC(40:3)	ME301999	0.79	1.02	0.88	1.32
2,3-Dinor-TXB2	ME301859	0.87	1.68	0.79	0.59
CL(72:5)	ME301922	0.73	1.11	1.15	1.01
SM(d18:0/26:0)	ME302101	1.01	1.14	0.81	1.04
PG(40:7)	ME302049	2.05	0.58	0.69	0.68
Adrenic acid	ME301875	0.65	1.87	0.42	1.05
PE(34:0)	ME302015	1.06	0.95	1.07	0.92
PE(P-36:3)/PE(O-36:4)	ME302032	0.85	1.03	1.08	1.04
PI(38:2)	ME302063	1.15	0.56	1.72	0.57
SM(d18:1/24:0)	ME302107	1.08	1.06	0.87	0.99
Sphinganine	ME302111	1.49	0.67	1.19	0.62
DHA	ME301932	1.69	0.85	0.99	0.47
CL(72:4)	ME301921	1.00	NA	1.00	NA
GlcCer(d18:1/24:1)	ME301951	0.87	1.08	1.03	1.02
cis-Erucic acid	ME301915	1.40	1.00	0.98	0.62
PC(34:2)	ME301987	1.09	1.05	0.75	1.10
CL(70:4)	ME301918	1.04	0.85	1.32	0.80
PS(40:3)	ME302090	0.57	1.58	0.80	1.04
PE(P-38:4)/PE(O-38:5)	ME302036	0.83	1.11	0.93	1.13
PE(38:6)	ME302025	1.47	0.85	0.88	0.77
PI(36:3)	ME302059	0.82	1.14	0.87	1.17
Cer(d18:0/26:1)	ME301903	1.29	1.00	1.01	0.70
CL(74:6)	ME301926	0.83	1.02	0.83	1.11
Cer(d18:1/26:1)	ME301911	1.66	0.70	0.99	0.65
GlcCer(d18:1/18:0)	ME301947	0.85	0.99	1.22	0.93
PA(40:6)	ME301979	1.25	0.84	1.01	0.89
CE(18:0)	ME301887	2.05	0.63	1.18	0.15
PI(38:1)	ME302062	0.39	0.92	1.48	1.14
PE(40:5)	ME302026	1.03	1.08	0.81	1.07
PE(P-36:1)/PE(O-36:2)	ME302030	1.14	0.70	1.29	0.87
PC(36:4)	ME301993	1.10	1.18	0.65	1.07
5,8,11-Eicosatrienoic acid	ME301867	1.12	1.33	0.82	0.73
Cer(d18:1/16:0)	ME301904	1.25	0.91	0.96	0.88
PE(P-36:2)/PE(O-36:3)	ME302031	1.04	0.75	1.28	0.94

Factors:

F1	Genotype:LDLR-KO \| Diet:High fat
F2	Genotype:LDLR-KO \| Diet:Normal
F3	Genotype:Wild type \| Diet:High fat
F4	Genotype:Wild type \| Diet:Normal

Data matrix