Clustering data with hclust algorithm for (Study ST001683)

HILIC POSITIVE ION MODE (Analysis AN002749)
MetaboliteStructureF1F2F3F4F5F6F7F8F9F10F11F12F13F14F15F16F17F18F19F20F21F22F23F24F25F26F27F28F29F30F31F32F33F34F35F36F37F38F39F40F41F42F43F44
1-METHYLGUANIDINEME392742NANANANANANA0.010.000.00NANANA0.050.040.060.030.010.010.380.730.290.280.290.300.250.280.290.150.275.694.862.880.010.010.010.010.010.00NANANA0.020.020.02
4-BROMO-PHENYLALANINEME3928460.270.270.300.280.280.280.430.470.700.300.290.290.840.840.890.880.911.020.900.991.501.371.361.491.311.371.521.351.461.461.361.311.521.511.461.521.521.470.340.310.330.270.270.27
4-GUANIDINOBUTANOIC ACIDME392764NANANANANANANANANANANANA0.040.490.040.400.120.211.381.860.560.290.480.530.130.380.420.430.382.695.651.71NANANANANANA0.060.040.070.760.570.62
5-VALEROLACTONEME3927730.520.460.440.550.540.370.531.090.90NANANA1.500.331.020.31NANANANA1.841.531.381.211.882.08NANANA1.080.861.020.300.520.220.461.070.68NANANANANANA
5-METHYLCYTOSINEME3927720.020.030.230.010.040.20NANANA1.131.150.820.201.450.501.71NANANANA1.890.381.811.890.202.07NANANA2.192.001.500.140.270.990.060.170.90NANANA0.490.470.49
4-CHLORO-PHENYLALANINEME3928470.160.170.190.160.170.170.400.340.690.300.290.270.310.340.310.350.700.810.730.820.610.560.540.600.510.541.100.891.070.990.930.894.925.054.915.285.075.120.320.290.320.260.260.26
5-METHOXY-3-INDOLEACETIC ACIDME3927710.460.260.490.300.130.48NANANA0.500.380.380.340.970.310.590.430.130.300.671.431.981.450.960.410.50NANANA2.192.621.293.933.632.900.410.800.39NANANA0.260.270.34
URSOCHOLIC ACIDME3929160.941.020.090.542.140.080.300.020.14NANANA1.520.030.910.05NANANANANANANANANANA1.993.792.25NANANA1.960.600.273.510.570.290.400.160.15NANANA
TRIMETHYLAMINE N-OXIDEME392912NANANANANANA0.000.040.00NANANA0.000.030.000.020.850.0215.730.770.110.010.200.100.010.160.300.190.272.742.721.28NANANANANANANANANA0.010.400.01
TRYPTOPHANME3929130.150.210.230.140.120.190.220.060.14NANANA0.891.380.700.770.420.520.030.033.472.252.032.291.781.051.221.151.400.130.120.091.390.971.560.440.320.560.440.370.48NANANA
ACETYL-CARNITINEME3927760.000.000.010.000.000.010.010.010.04NANANA0.050.050.000.032.282.730.170.270.160.050.160.100.020.066.334.955.140.370.330.23NANANANANANANANANANANANA
HYPOXANTHINEME3928370.130.280.110.080.240.080.020.080.02NANANA17.980.6215.730.451.120.280.080.100.711.840.810.211.820.390.020.280.03NANANA0.330.680.620.120.540.500.110.110.01NANANA
TRYPTOPHAN-2,4,5,6,7-D5ME3928550.430.410.470.420.410.480.070.030.050.450.450.441.371.221.481.180.360.331.551.521.381.201.211.341.111.220.390.450.402.421.822.571.891.911.871.931.871.890.120.120.130.480.550.50
TYROSINEME3929150.380.390.340.400.420.210.360.310.47NANANA3.992.943.001.841.401.461.111.601.790.831.24NANANA0.800.740.76NANANANANANANANANANANANANANANA
HISTIDINEME3928330.160.200.250.180.190.16NANANANANANANANANANA0.931.080.060.033.541.802.402.531.431.251.240.951.200.050.050.030.630.601.020.330.380.460.440.500.410.010.010.01
CARNITINE-TRIMETHYL-D9ME3928490.100.090.120.120.120.16NANANANANANA0.060.080.080.120.020.010.270.351.401.201.171.791.571.710.150.140.163.152.803.010.400.420.420.610.520.57NANANA0.160.170.17
CATECHOLME3928030.700.660.580.770.750.51NANANA0.840.860.890.890.790.790.831.591.510.991.130.760.800.631.000.960.991.381.001.272.321.791.880.520.510.450.651.470.91NANANANANANA
HOMOCITRULLINEME392835NANANANANANA0.130.130.190.770.871.060.150.120.160.100.310.121.100.690.811.140.600.260.410.221.000.891.025.177.814.230.240.150.240.230.140.17NANANA0.370.390.30
BETAINEME3927950.040.030.030.050.040.031.330.571.550.420.220.260.050.110.070.112.362.031.691.000.220.240.200.230.220.184.443.803.692.212.041.190.150.160.150.130.320.181.201.081.250.470.270.28
HISTAMINEME3928320.100.110.030.140.200.040.100.060.19NANANA1.830.102.410.100.570.310.650.653.292.901.153.222.791.250.680.400.451.371.400.670.281.380.230.251.390.180.090.170.090.240.300.34
TRIGONELLINEME3929110.000.000.000.010.000.000.340.110.440.890.810.900.010.010.010.010.711.083.492.830.030.030.020.040.030.021.861.191.106.085.893.230.010.020.010.010.030.010.330.250.321.451.281.21
GLUCOSAMINEME3928250.040.030.310.040.030.27NANANANANANA0.211.710.451.97NANA0.100.170.340.584.870.320.605.02NANANANANANA0.200.461.930.190.511.86NANANANANANA
GLYCINEME392828NANANANANANANANANANANANA0.280.510.190.240.100.180.030.055.262.133.863.211.321.700.800.480.850.110.120.070.020.010.040.010.010.01NANANANANANA
TRANEXAMIC ACIDME3929090.020.020.010.020.020.010.660.260.722.752.392.750.010.080.020.082.362.525.115.310.070.070.060.080.070.071.891.331.373.752.591.830.100.080.100.120.100.100.630.530.721.351.201.32
GLUTAMINEME3928270.140.170.360.160.130.220.570.300.920.080.050.030.500.990.290.710.970.940.080.063.980.543.433.320.342.532.201.611.960.160.130.080.610.661.620.390.550.880.390.400.360.040.030.02
THREONINEME3929080.060.080.390.050.050.240.180.110.270.010.010.010.521.230.381.030.210.350.020.036.940.857.066.140.345.770.870.510.860.090.080.040.220.241.280.060.101.100.120.110.16NANANA
2-FLUROPHENYLGLYCINEME392845NANANANANANANANANA0.310.320.280.460.350.620.380.480.540.400.370.780.570.580.610.490.510.310.290.350.340.370.303.663.994.134.413.774.50NANANANANANA
THIAMINEME3929060.000.000.010.000.020.02NANANA0.741.062.291.240.160.690.36NANA1.473.500.610.340.460.670.430.680.570.550.455.403.802.070.010.010.090.010.010.37NANANA0.111.011.17
PROGESTERONE-D9ME3928540.800.900.810.550.370.470.890.920.900.300.290.37NANANANA0.340.430.840.991.081.370.950.570.480.501.571.081.420.800.750.732.542.351.902.062.671.780.940.741.030.400.440.44
GLUTAMIC ACIDME3928260.450.540.250.410.630.170.080.030.13NANANA2.070.832.100.740.080.11NANA4.401.264.493.360.483.720.510.300.560.030.040.021.862.271.201.101.600.790.060.060.06NANANA
OPHTHALMIC ACIDME392879NANANANANANANANANA0.340.320.660.610.840.870.560.890.040.541.982.820.912.822.970.742.990.330.250.280.760.450.57NANANANANANANANANANANANA
ALANINEME3927820.070.090.050.070.070.04NANANA0.070.060.051.530.931.330.540.971.160.620.753.502.372.322.121.290.931.931.271.890.930.840.530.050.050.060.020.020.030.150.140.15NANANA
PUTRESCINEME3928890.810.080.000.980.130.000.150.070.18NANANA0.080.010.930.010.380.404.866.960.153.730.080.134.210.091.421.070.642.091.513.080.020.160.010.020.190.000.180.160.170.280.540.11
1-METHYLNICOTINAMIDEME3927430.060.020.030.070.030.020.050.040.06NANANA0.040.110.050.120.070.051.692.460.610.530.250.540.570.240.230.170.175.577.074.160.360.140.190.300.120.180.040.040.041.981.861.63
ALLO-ISOLEUCINE, ISOLEUCINEME3927830.130.150.130.140.070.080.230.100.47NANANA1.581.602.220.941.181.010.160.063.292.442.341.911.751.001.180.971.20NANANA0.830.681.050.160.220.400.190.170.200.130.150.18
RIBOFLAVINME392893NANANANANANANANANA0.160.100.262.060.052.150.05NANA1.410.481.030.840.110.931.400.030.550.370.292.784.061.770.730.200.080.980.260.05NANANA0.020.030.03
ORNITHINEME3928800.020.020.040.030.020.030.870.271.02NANANA0.690.170.850.092.424.460.080.060.510.540.340.420.400.245.252.727.150.240.620.150.460.120.230.180.090.141.830.821.230.020.040.03
ASPARAGINEME3927910.010.020.430.040.030.250.090.070.130.030.030.040.441.250.080.780.090.150.070.086.030.424.014.630.312.690.420.250.380.270.310.130.160.751.980.060.480.880.070.070.09NANANA
3,5-DIMETHOXYPHENOLME3927620.720.520.540.640.610.18NANANA0.740.670.861.270.650.370.542.261.81NANA1.702.021.660.851.311.201.211.461.10NANANANANANANANANANANANA0.340.180.48
AGMATINEME3927810.340.520.050.080.040.04NANANANANANANANANANANANA0.300.640.793.270.350.732.600.350.590.640.841.953.160.961.140.610.180.390.480.09NANANA0.200.470.23
CYTOSINEME3928140.090.120.190.030.090.210.150.210.150.310.230.270.481.720.341.920.400.301.471.021.860.482.122.210.162.491.200.911.012.341.981.25NANANANANANANANANA0.510.450.43
CITRULLINEME3928060.350.440.050.170.350.030.540.351.29NANANA2.080.201.800.141.021.34NANA0.911.570.660.801.320.573.382.053.45NANANA0.120.110.290.100.050.180.610.500.70NANANA
CADAVERINEME3927972.292.480.012.412.910.01NANANA0.020.010.010.070.020.090.02NANA0.201.580.395.230.150.341.420.15NANANA2.021.090.390.241.140.140.251.010.19NANANA0.310.860.48
CHOLINEME3928041.300.230.551.480.250.500.340.130.46NANANANANANANA0.360.440.310.332.732.451.352.742.411.310.820.840.861.021.210.652.920.481.593.110.231.600.340.180.330.230.210.19
ARGININEME3927890.160.270.310.140.160.220.520.220.800.010.020.051.251.330.550.850.940.990.040.043.123.282.432.142.501.412.081.511.470.140.260.061.010.520.900.390.160.340.390.360.500.020.030.02
SN-GLYCERO-3-PHOSPHOCHOLINEME3928980.070.120.060.140.150.092.060.721.460.080.100.100.050.420.100.363.063.000.180.700.550.290.400.480.380.394.683.574.480.460.340.170.190.160.130.200.120.082.832.812.960.140.130.29
SERINEME3928960.060.090.130.060.060.070.080.050.10NANANA0.480.770.260.520.130.18NANA5.830.744.274.180.512.180.360.240.330.090.120.040.390.290.890.140.140.360.070.060.08NANANA
PHENYLALANINE-2,3,4,5,6-D5ME3928530.360.350.440.380.370.430.170.060.130.470.470.441.181.261.221.291.501.501.591.731.361.191.221.391.141.280.991.051.141.831.611.781.421.471.451.471.491.470.210.220.250.360.390.36
PHENYLALANINEME3928820.250.310.220.280.180.200.150.040.100.020.020.021.971.571.271.011.191.240.040.043.852.792.572.522.321.300.950.821.100.090.090.071.431.141.430.430.350.580.200.190.230.010.010.01
N-METHYL-ASPARTIC ACIDME3928720.400.400.020.290.350.01NANANANANANA0.400.040.520.04NANANANA4.830.783.463.800.333.020.280.250.27NANANA3.170.170.111.720.150.07NANANANANANA
METHIONINE-METHYL-D3ME3928520.390.350.440.400.370.410.360.300.660.090.090.090.991.311.071.371.361.391.151.211.191.291.261.231.291.311.311.081.301.231.251.032.002.051.952.132.082.040.340.320.350.220.230.21
LINOLENIC ACIDME3928590.550.710.440.710.570.400.350.090.34NANANA0.250.380.420.380.150.24NANA1.341.370.812.181.421.080.350.390.36NANANA3.062.761.902.394.182.540.250.330.450.020.020.01
CREATINEME3928100.090.100.060.100.150.090.600.210.65NANANA0.120.310.010.291.011.011.541.900.600.820.710.450.680.382.591.872.273.543.151.910.360.250.400.240.180.300.570.490.521.040.651.09
CREATININEME3928110.290.350.200.290.430.170.100.040.041.491.471.61NANANANANANANANA0.950.870.752.281.991.920.580.380.481.981.741.651.541.921.311.531.931.350.080.040.101.671.491.56
N-ALPHA-ACETYL-LYSINEME3928700.390.310.400.470.360.300.090.050.150.160.160.241.891.512.011.130.150.172.872.701.511.661.541.451.191.310.290.220.292.432.911.580.820.850.830.680.750.63NANANA0.860.640.76
ADIPIC ACIDME3927800.570.520.480.600.600.381.210.671.761.231.261.180.480.530.410.590.450.360.640.581.741.501.681.811.602.251.621.051.581.481.221.660.310.360.250.270.750.410.180.200.200.140.120.17
TAUROURSODEOXYCHOLIC ACIDME3929050.070.070.060.100.180.070.130.000.46NANANANANANANA0.010.77NANA0.620.550.301.212.100.557.225.351.88NANANA0.420.340.220.650.760.341.270.430.14NANANA
TAUROCHOLIC ACIDME392904NANANANANANA0.690.012.25NANANA0.000.230.000.460.011.50NANA0.961.420.633.811.490.962.100.301.33NANANA0.560.440.240.961.170.411.651.350.16NANANA
SPERMINEME3929000.090.110.120.170.120.30NANANANANANA0.350.170.320.140.440.58NANA0.550.550.450.560.400.504.992.448.101.971.791.800.280.260.351.260.771.33NANANA0.180.200.23
ASPARTIC ACIDME3927920.350.440.250.330.310.170.090.060.18NANANA3.301.261.480.800.100.16NANA2.281.802.391.520.581.460.420.210.57NANANA1.981.731.440.430.900.60NANANANANANA
CARNITINEME3928000.030.030.030.030.040.03NANANANANANA0.020.030.020.030.360.301.201.280.320.300.240.310.100.240.780.770.765.665.693.360.100.080.140.090.060.12NANANANANANA
DEOXYCYTIDINEME3928170.090.120.270.020.080.240.220.380.19NANANA0.431.450.281.310.360.22NANA2.940.973.492.280.122.461.471.111.24NANANA1.110.301.680.330.082.00NANANANANANA
NICOTINAMIDEME3928770.020.010.090.070.110.080.170.180.341.050.811.610.441.050.340.413.012.675.144.890.380.250.61NANANA1.651.520.982.432.072.452.210.650.600.980.110.29NANANA0.910.600.67
NEPSILON,NEPSILON,NEPSILON-TRIMETHYLLYSINEME3928760.170.200.220.150.180.180.150.140.300.881.051.000.210.420.220.400.250.251.942.141.931.841.701.901.701.650.540.430.542.242.571.910.710.540.640.530.410.540.160.120.121.261.090.97
LYSINEME3928620.180.310.250.190.220.170.680.300.880.010.010.012.191.111.520.581.311.810.020.022.773.312.001.732.111.022.171.761.930.050.100.031.070.610.790.360.260.280.880.600.880.010.010.01
N-ACETYLPUTRESCINEME3928693.630.170.022.650.120.02NANANA0.540.330.310.080.030.870.03NANA0.250.231.232.080.141.506.120.190.040.060.040.080.060.05NANANANANANANANANA0.170.140.11
METHIONINEME3928660.260.360.140.250.230.120.700.230.910.060.030.021.981.151.150.690.801.57NANA2.511.301.831.510.590.833.031.472.18NANANA1.180.911.100.480.370.520.640.540.600.050.030.03
INDOLE-2,4,5,6,7-D5-3-ACETIC ACIDME392850NANANANANANA0.290.350.82NANANA0.090.120.080.14NANA0.140.161.171.031.101.110.930.990.580.690.591.981.341.961.501.420.993.332.323.350.130.060.090.320.520.49
LEUCINE-5,5,5-D3ME3928510.310.290.370.330.280.460.280.150.330.560.570.510.480.620.540.680.520.490.510.521.531.361.391.631.411.621.471.361.381.371.241.291.881.961.942.001.982.040.180.170.160.190.190.21
LEUCINE, NORLEUCINEME3928580.200.280.150.230.100.140.290.120.420.160.140.120.690.780.520.580.500.490.010.034.283.653.452.823.041.822.021.732.31NANANA1.211.111.250.220.340.560.210.180.19NANANA
RAFFINOSEME3928910.000.000.620.000.000.54NANANA0.010.010.020.010.170.010.19NANA0.020.063.530.083.453.860.073.610.020.010.020.100.050.070.013.343.450.023.523.57NANANA0.010.010.01

Factors:

F1Experiment:community | Sample_type:caecal | Colonization:Bt_Ca_Er_Pd_Et
F2Experiment:community | Sample_type:caecal | Colonization:Cs_Bt_Ca_Er_Pd_Et
F3Experiment:community | Sample_type:caecal | Colonization:germ-free
F4Experiment:community | Sample_type:feces | Colonization:Bt_Ca_Er_Pd_Et
F5Experiment:community | Sample_type:feces | Colonization:Cs_Bt_Ca_Er_Pd_Et
F6Experiment:community | Sample_type:feces | Colonization:germ-free
F7Experiment:community | Sample_type:serum | Colonization:Bt_Ca_Er_Pd_Et
F8Experiment:community | Sample_type:serum | Colonization:Cs_Bt_Ca_Er_Pd_Et
F9Experiment:community | Sample_type:serum | Colonization:germ-free
F10Experiment:community | Sample_type:urine | Colonization:Bt_Ca_Er_Pd_Et
F11Experiment:community | Sample_type:urine | Colonization:Cs_Bt_Ca_Er_Pd_Et
F12Experiment:community | Sample_type:urine | Colonization:germ-free
F13Experiment:conventional | Sample_type:caecal | Colonization:conventional
F14Experiment:conventional | Sample_type:caecal | Colonization:germ-free
F15Experiment:conventional | Sample_type:feces | Colonization:conventional
F16Experiment:conventional | Sample_type:feces | Colonization:germ-free
F17Experiment:conventional | Sample_type:serum | Colonization:conventional
F18Experiment:conventional | Sample_type:serum | Colonization:germ-free
F19Experiment:conventional | Sample_type:urine | Colonization:conventional
F20Experiment:conventional | Sample_type:urine | Colonization:germ-free
F21Experiment:mono-colonization_2 | Sample_type:caecal | Colonization:As
F22Experiment:mono-colonization_2 | Sample_type:caecal | Colonization:Cp
F23Experiment:mono-colonization_2 | Sample_type:caecal | Colonization:germ-free
F24Experiment:mono-colonization_2 | Sample_type:feces | Colonization:As
F25Experiment:mono-colonization_2 | Sample_type:feces | Colonization:Cp
F26Experiment:mono-colonization_2 | Sample_type:feces | Colonization:germ-free
F27Experiment:mono-colonization_2 | Sample_type:serum | Colonization:As
F28Experiment:mono-colonization_2 | Sample_type:serum | Colonization:Cp
F29Experiment:mono-colonization_2 | Sample_type:serum | Colonization:germ-free
F30Experiment:mono-colonization_2 | Sample_type:urine | Colonization:As
F31Experiment:mono-colonization_2 | Sample_type:urine | Colonization:Cp
F32Experiment:mono-colonization_2 | Sample_type:urine | Colonization:germ-free
F33Experiment:mono-colonization | Sample_type:caecal | Colonization:Bt
F34Experiment:mono-colonization | Sample_type:caecal | Colonization:Cs
F35Experiment:mono-colonization | Sample_type:caecal | Colonization:germ-free
F36Experiment:mono-colonization | Sample_type:feces | Colonization:Bt
F37Experiment:mono-colonization | Sample_type:feces | Colonization:Cs
F38Experiment:mono-colonization | Sample_type:feces | Colonization:germ-free
F39Experiment:mono-colonization | Sample_type:serum | Colonization:Bt
F40Experiment:mono-colonization | Sample_type:serum | Colonization:Cs
F41Experiment:mono-colonization | Sample_type:serum | Colonization:germ-free
F42Experiment:mono-colonization | Sample_type:urine | Colonization:Bt
F43Experiment:mono-colonization | Sample_type:urine | Colonization:Cs
F44Experiment:mono-colonization | Sample_type:urine | Colonization:germ-free
Data matrix
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