Clustering data with hclust algorithm for (Study ST001752)
(Analysis AN002855)Metabolite | Structure | F1 | F2 | F3 | F4 | F5 | F6 | F7 | F8 | F9 | F10 | F11 | F12 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
acetyl coenzyme A | ME406147 | 0.41 | 0.83 | 1.01 | 1.15 | 0.55 | 0.08 | 2.63 | 3.78 | 0.17 | 0.75 | 0.34 | 0.05 |
glucose 6-phosphate | ME406153 | 0.54 | 0.28 | 0.39 | 0.51 | 1.56 | 0.40 | 0.91 | 1.14 | 1.62 | 1.76 | 1.96 | 0.94 |
glutamine | ME406160 | 0.32 | 0.36 | 0.45 | 0.43 | 0.63 | 0.30 | 1.77 | 1.39 | 1.68 | 1.47 | 1.47 | 2.11 |
phosphoenolpyruvic acid | ME406155 | 0.04 | 0.06 | 0.07 | 0.04 | 0.10 | 0.02 | 1.73 | 2.24 | 1.87 | 1.91 | 1.95 | 2.46 |
pyruvic acid | ME406148 | 3.68 | 0.52 | 2.48 | 0.90 | 0.12 | 1.05 | 0.41 | 0.41 | 0.67 | 0.71 | 0.52 | 0.54 |
glutamic acid | ME406151 | 1.84 | 1.39 | 1.34 | 1.67 | 1.45 | 1.07 | 0.23 | 0.19 | 0.35 | 1.55 | 0.36 | 0.57 |
succinic acid | ME406150 | 1.87 | 1.34 | 1.42 | 1.92 | 1.38 | 1.17 | 0.11 | 0.13 | 0.55 | 0.60 | 0.80 | 0.57 |
malic acid | ME406159 | 2.52 | 2.32 | 1.76 | 2.21 | 0.91 | 1.54 | 0.12 | 0.14 | 0.13 | 0.17 | 0.12 | 0.06 |
citric acid | ME406149 | 2.61 | 1.60 | 1.60 | 2.71 | 1.65 | 1.26 | 0.05 | 0.05 | 0.14 | 0.13 | 0.10 | 0.09 |
lactic acid | ME406156 | 2.29 | 1.88 | 1.85 | 2.15 | 1.85 | 1.47 | 0.05 | 0.06 | 0.10 | 0.09 | 0.09 | 0.11 |
alpha ketoglutaric acid | ME406164 | 1.83 | 0.46 | 0.66 | 1.11 | 0.64 | 1.26 | 0.44 | 0.56 | 0.80 | 2.49 | 0.80 | 0.87 |
fructose 1,6-bisphosphate | ME406162 | 0.71 | 0.99 | 1.22 | 2.41 | 1.49 | 0.43 | 0.52 | 0.88 | 0.77 | 0.99 | 1.02 | 1.06 |
cis-aconitic acid | ME406152 | 1.30 | 0.82 | 0.95 | 1.36 | 1.06 | 0.61 | 0.34 | 0.19 | 1.68 | 0.65 | 1.45 | 1.89 |
asparagine | ME406158 | 1.96 | 1.25 | 0.81 | 2.09 | 0.44 | 0.94 | 0.81 | 0.70 | 0.71 | 0.68 | 0.73 | 0.82 |
aspartic acid | ME406157 | 1.62 | 0.99 | 0.99 | 1.52 | 0.25 | 0.87 | 0.90 | 0.72 | 1.01 | 0.89 | 0.82 | 1.43 |
glucose | ME406163 | 0.86 | 0.70 | 0.71 | 0.83 | 0.81 | 0.54 | 1.52 | 1.36 | 1.17 | 1.07 | 1.23 | 1.30 |
alanine | ME406161 | 1.12 | 0.96 | 0.96 | 1.05 | 0.96 | 0.72 | 0.93 | 0.89 | 1.23 | 1.21 | 1.17 | 0.80 |
fructose 6-phosphate | ME406154 | 1.17 | 0.84 | 0.78 | 1.16 | 0.83 | 0.83 | 0.64 | 0.76 | 1.06 | 1.24 | 1.65 | 1.06 |
Factors:
F1 | Condition:OD0.5 | Strain:delta_GltA_pCtrl |
F2 | Condition:OD0.5 | Strain:delta_GltA_pVcdP |
F3 | Condition:OD0.5 | Strain:delta_VcdR_pCtrl |
F4 | Condition:OD0.5 | Strain:delta_VcdR_pVcdP |
F5 | Condition:OD0.5 | Strain:delta_VcdR_pVcdR |
F6 | Condition:OD0.5 | Strain:WT_pCtrl |
F7 | Condition:Overnight | Strain:delta_GltA_pCtrl |
F8 | Condition:Overnight | Strain:delta_GltA_pVcdP |
F9 | Condition:Overnight | Strain:delta_VcdR_pCtrl |
F10 | Condition:Overnight | Strain:delta_VcdR_pVcdP |
F11 | Condition:Overnight | Strain:delta_VcdR_pVcdR |
F12 | Condition:Overnight | Strain:WT_pCtrl |