Metabolomics Workbench : NIH Data Repository

Clustering data with hclust algorithm for (Study ST001850)

(Analysis AN002997)

Metabolite	Structure	F1	F2	F3
Xanthylic acid	ME427035	0.89	1.92	0.19
Uridine diphosphate glucose	ME427033	0.62	1.04	1.35
NADH	ME427000	0.51	0.87	1.62
Phosphoric acid	ME427009	0.69	0.68	1.63
UDP-Glucose	ME427025	0.66	0.87	1.47
dCMP	ME426952	0.74	0.77	1.49
Pyrophosphate	ME427013	0.76	0.77	1.47
dUMP	ME426956	0.41	0.48	2.11
Inosine	ME426978	0.82	0.39	1.79
Uridine	ME427028	0.72	0.50	1.78
ADP	ME426930	1.01	1.25	0.74
Guanosine triphosphate	ME426975	0.98	1.23	0.79
CDP	ME426934	0.97	1.17	0.86
Guanosine diphosphate	ME426972	1.00	1.17	0.83
3-Sulfinoalanine	ME426920	1.09	1.09	0.81
Oxoglutaric acid	ME427005	1.05	1.11	0.85
Succinic acid semialdehyde	ME427020	1.04	1.10	0.85
Cytidine triphosphate	ME426941	0.89	1.30	0.81
Uridine triphosphate	ME427034	0.86	1.31	0.83
Glutathione	ME426969	0.83	1.45	0.72
Adenosine triphosphate	ME426929	0.91	1.39	0.70
dGTP	ME426954	0.91	1.39	0.70
5-L-Glutamyl-L-alanine	ME426922	0.98	1.35	0.67
Ribose 1,5-bisphosphate	ME427017	1.00	1.32	0.68
Inosinic acid	ME426979	1.38	1.24	0.38
Phosphoserine	ME427010	1.37	1.26	0.37
Fructose 1,6-bisphosphate	ME426958	1.12	1.36	0.52
Glycerol 3-phosphate	ME426970	1.17	1.29	0.54
Phosphocreatine	ME427007	1.12	1.31	0.56
D-Glucuronic acid 1-phosphate	ME426946	1.31	0.95	0.74
N-Acetyl-L-aspartic acid	ME426994	1.30	0.92	0.78
Pyruvic acid	ME427014	1.21	1.10	0.69
Cytidine monophosphate	ME426939	1.22	0.97	0.81
L-beta-aspartyl-L-glutamic acid	ME426984	1.21	1.04	0.74
L-4-Hydroxyglutamate semialdehyde	ME426982	1.17	1.04	0.78
L-Lactic acid	ME426986	1.19	1.02	0.79
Mannose 6-phosphate	ME426989	1.47	0.93	0.60
Fructose 6-phosphate	ME426959	1.51	0.95	0.54
N-Acetyl-D-Glucosamine 6-Phosphate	ME426992	1.48	0.96	0.56
Beta-D-Glucose 6-phosphate	ME426933	1.32	1.06	0.62
Pyridoxal 5^-phosphate	ME427011	1.40	1.01	0.59
5^-Phosphoribosyl-N-formylglycinamide	ME426921	1.37	1.17	0.46
dTDP	ME426955	1.36	1.11	0.54
Uridine 5^-diphosphate	ME427029	0.91	1.16	0.93
Galactose 1-phosphate	ME426962	0.86	1.18	0.97
L-Malic acid	ME426987	0.86	1.16	0.98
5-L-Glutamyl-taurine	ME426923	0.87	1.09	1.05
Glucose 1-phosphate	ME426967	0.83	1.11	1.06
dCTP	ME426953	0.77	1.09	1.14
Fructose 1-phosphate	ME426957	0.80	1.10	1.10
Uridine 5^-monophosphate	ME427030	0.80	1.09	1.10
dCDP	ME426951	0.87	0.98	1.15
Alpha-D-Glucose 1,6-bisphosphate	ME426932	0.94	0.95	1.11
D-Mannose 1-phosphate	ME426947	0.92	0.96	1.12
Oxalic acid	ME427004	1.03	1.06	0.91
3-Dehydro-L-gulonate	ME426917	1.02	1.02	0.95
Hydroxypropanedioic acid	ME426977	1.01	1.01	0.98
Fumaric acid	ME426960	0.93	1.10	0.97
Isocitric acid	ME426980	0.94	1.05	1.01
cis-Aconitic acid	ME426936	0.91	1.04	1.05
Threonic acid	ME427024	0.92	1.04	1.04
Orotidine	ME427003	0.90	0.81	1.29
Ribonic acid	ME427015	0.96	0.75	1.29
D-Fructose 2,6-bisphosphate	ME426943	1.10	0.68	1.22
Pantothenic acid	ME427006	1.10	0.67	1.23
D-Erythrose 4-phosphate	ME426942	1.05	0.86	1.10
Guanosine diphosphate mannose	ME426973	1.07	0.84	1.08
CDP-Ethanolamine	ME426935	1.05	0.80	1.16
Glycerylphosphorylethanolamine	ME426971	1.05	0.82	1.13
2-Aminomuconic acid semialdehyde	ME426910	0.98	0.83	1.19
2-Hydroxyglutarate	ME426913	1.04	0.74	1.22
Adenosine diphosphate ribose	ME426927	1.03	0.78	1.19
Gluconic acid	ME426966	1.01	0.77	1.22
Adenosine monophosphate	ME426928	1.11	1.02	0.87
Guanosine monophosphate	ME426974	1.15	0.99	0.86
D-Glucose	ME426945	1.14	0.93	0.93
Galacturonic acid	ME426963	1.14	0.93	0.93
Succinic acid	ME427019	1.11	0.98	0.92
2-Propylglutaric acid	ME426916	1.11	0.97	0.93
Methylmalonic acid	ME426991	1.11	0.97	0.92
Citric acid	ME426937	0.99	0.96	1.05
L-Aspartic acid	ME426983	0.99	0.95	1.06
L-Glutamic acid	ME426985	1.05	0.90	1.05
Taurine	ME427022	1.06	0.93	1.01
2-Hydroxybutyric acid	ME426912	1.08	0.91	1.01
3-Hydroxybutyric acid	ME426918	1.08	0.91	1.01
Sulfate	ME427021	1.17	0.74	1.08
Uridine diphosphate-N-acetylgalactosamine	ME427031	1.18	0.76	1.06
ADP-glucose	ME426931	1.18	0.77	1.05
Uridine diphosphate-N-acetylglucosamine	ME427032	1.18	0.77	1.04
Ketoleucine	ME426981	1.13	0.80	1.06
Malonic acid	ME426988	1.11	0.83	1.06
2-Methylglutaric acid	ME426914	1.16	0.83	1.01
Pyroglutamic acid	ME427012	1.13	0.85	1.02
Glutaric acid	ME426968	1.22	0.82	0.96
Cysteic acid	ME426938	1.27	0.82	0.91
Orotic acid	ME427002	1.32	0.80	0.87
Gamma Glutamylglutamic acid	ME426964	1.11	0.54	1.35
5-Thymidylic acid	ME426924	1.33	0.53	1.15
Mesaconic acid	ME426990	1.40	0.56	1.04
D-Glucaric acid	ME426944	1.35	0.60	1.06
Galactaric acid	ME426961	1.35	0.60	1.05
Glucaric acid	ME426965	1.35	0.60	1.05
Sedoheptulose 1,7-bisphosphate	ME427018	1.81	1.16	0.03
Thiamine pyrophosphate	ME427023	1.91	0.97	0.13
2-Hydroxyadipic acid	ME426911	1.79	0.49	0.72
3-Hydroxymethylglutaric acid	ME426919	1.79	0.49	0.72
Cytidine monophosphate N-acetylneuraminic acid	ME426940	1.72	0.44	0.84
N-Acetylneuraminic acid	ME426998	1.72	0.36	0.92
dADP	ME426950	1.74	0.86	0.40
O-Phosphoethanolamine	ME427001	1.75	0.88	0.37
Uric acid	ME427027	1.86	0.60	0.54
N-Acetylglutamic acid	ME426996	1.70	0.73	0.58
2-Phospho-D-glyceric acid	ME426915	1.70	0.73	0.57
(2R)-2-Hydroxy-3-(phosphonatooxy)propanoate	ME426909	1.70	0.73	0.57
N-Acetylleucine	ME426997	1.68	0.69	0.64
D-Ribose 5-phosphate	ME426948	1.73	0.67	0.60
Homocysteinesulfinic acid	ME426976	1.75	0.66	0.59
D-Sedoheptulose 7-phosphate	ME426949	1.64	0.84	0.52
Ribose 1-phosphate	ME427016	1.58	0.80	0.62
Ureidosuccinic acid	ME427026	1.50	0.77	0.73
N-Acetyl-glucosamine 1-phosphate	ME426993	1.61	0.58	0.81
N-Acetyl-L-methionine	ME426995	1.60	0.69	0.71
N-Formyl-L-methionine	ME426999	1.65	0.64	0.71
Phosphoenolpyruvic acid	ME427008	1.62	0.65	0.73
6-Phosphogluconic acid	ME426925	2.40	0.37	0.22
Acetylcysteine	ME426926	2.09	0.47	0.44

Factors:

F1	Treatment:PGCOE
F2	Treatment:PLKO
F3	Treatment:Tug1-KD

Data matrix