Metabolomics Workbench : NIH Data Repository

Clustering data with hclust algorithm for (Study ST002373)

(Analysis AN003868)

Metabolite	Structure	F1	F2	F3
Carbamoyl phosphate	ME561158	1.33	1.42	1.57
pyruvate	ME561132	1.36	1.96	1.82
shikimate-3-phosphate	ME561189	0.54	0.83	1.45
trehalose-6-Phosphate	ME561201	0.50	0.68	1.54
octulose-monophosphate (O8P-O1P)	ME561196	0.34	0.71	1.49
Pyrophosphate	ME561177	0.37	0.76	1.46
O-acetyl-L-serine	ME561078	0.90	0.87	1.52
ornithine	ME561068	0.69	0.89	1.60
aconitate	ME561174	0.81	1.11	1.68
lactate	ME561133	0.79	1.08	1.75
L-arginino-succinate	ME561113	0.81	1.01	1.73
Citraconic acid	ME561147	0.88	1.04	1.55
2-oxobutanoate	ME561134	0.93	1.11	1.51
acetoacetate	ME561135	0.92	1.16	1.54
Methionine sulfoxide	ME561083	0.56	0.77	0.63
Glycerophosphocholine	ME561104	1.12	1.07	1.43
thiamine	ME561107	1.31	1.03	1.25
inosine	ME561193	1.17	0.82	1.12
orotate	ME561163	1.17	0.93	1.07
spermidine	ME561126	1.17	0.95	1.10
5-methyl-THF	ME561124	1.22	0.88	1.02
1-Methyl-Histidine	ME561086	1.23	0.93	1.07
dihydroorotate	ME561164	1.21	0.91	1.05
phosphoenolpyruvate	ME561171	1.32	0.94	1.02
arginine	ME561088	1.17	0.98	0.95
Ascorbic acid	ME561175	1.26	0.95	0.93
3-methylphenylacetic acid	ME561160	1.22	0.96	0.96
Hydroxyphenylacetic acid	ME561162	1.22	0.98	0.94
Nicotinamide ribotide	ME561119	0.93	0.82	0.97
creatinine	ME561053	1.14	0.97	1.02
homoserine	ME561058	1.16	0.94	1.01
citrulline	ME561089	1.13	0.93	0.98
Imidazole	ME561047	1.13	0.97	0.98
glutamine	ME561077	1.06	1.00	0.91
guanidinosuccinate	ME561131	1.11	0.93	0.92
proline	ME561054	1.05	0.94	0.92
N-acetyl-L-ornithine	ME561087	1.10	0.96	0.94
Sedoheptulose 1,7-bisphosphate (SBP)	ME561198	1.08	0.97	0.97
asparagine	ME561069	1.07	0.96	0.95
xanthine	ME561161	1.06	0.97	0.95
2-keto-isovalerate	ME561140	0.99	1.01	0.96
nicotinate	ME561144	0.99	0.99	0.96
octulose-1,8-bisphosphate (OBP)	ME561200	0.99	0.90	0.96
1-pyrroline-5-carboxylate(P5C)	ME561130	1.04	0.91	0.98
glycine	ME561048	1.04	0.88	1.00
UDP-D-glucose	ME561208	0.86	1.03	1.02
FMN	ME561204	0.92	1.02	1.02
UDP-N-acetyl-glucosamine	ME561209	0.89	1.00	1.03
fumarate	ME561138	0.96	1.01	1.09
leucine-isoleucine	ME561067	0.97	0.98	1.11
Maleic acid	ME561139	0.95	0.99	1.11
DL-Pipecolic acid	ME561065	0.94	0.99	1.06
Urea	ME561045	0.97	0.97	1.06
acetylphosphate	ME561157	0.94	1.04	1.07
carnitine	ME561082	0.98	0.99	1.03
ethanolamine	ME561046	0.96	1.04	1.04
glutamate	ME561079	0.98	1.02	1.04
Phenyllactic acid	ME561169	1.01	0.95	1.17
2-Isopropylmalic acid	ME561176	0.98	0.94	1.13
nicotinamide	ME561062	1.00	0.93	1.13
isocitrate	ME561180	1.06	0.87	1.07
myo-inositol	ME561178	1.04	0.90	1.06
alanine	ME561049	1.05	0.89	1.15
sarcosine	ME561127	1.11	0.91	1.13
3-S-methylthiopropionate	ME561143	1.11	1.06	1.03
dTMP	ME561117	1.06	0.96	1.01
pantothenate	ME561183	1.08	0.93	1.00
S-ribosyl-L-homocysteine_pos	ME561108	1.06	0.99	1.04
allantoin	ME561165	1.03	0.99	1.03
hydroxyproline	ME561066	1.03	0.99	1.00
aspartate	ME561070	1.02	0.97	1.07
biotin	ME561102	1.05	0.94	1.04
creatine	ME561061	1.06	0.96	1.06
quinolinate	ME561170	1.07	0.96	1.06
6-phospho-D-gluconate	ME561194	1.01	1.02	1.12
cystathionine	ME561099	1.08	0.96	1.11
folate	ME561123	1.09	0.99	1.09
glutathione	ME561116	1.06	1.00	1.10
trans, trans-farnesyl diphosphate	ME561199	0.70	1.11	0.81
Atrolactic acid	ME561168	0.76	1.09	0.99
dUMP_neg	ME561195	0.80	1.13	1.05
succinate	ME561141	0.75	1.14	0.91
fructose-6-phosphate	ME561191	0.68	1.15	0.97
Methylmalonic acid	ME561142	0.70	1.11	1.00
Ng,NG-dimethyl-L-arginine	ME561096	1.10	1.06	1.21
Uric acid	ME561172	1.04	1.00	1.30
Kynurenine	ME561098	1.01	1.02	1.22
Aminoadipic acid	ME561166	0.94	0.97	1.19
Indole-3-carboxylic acid	ME561167	0.94	1.00	1.25
prephenate	ME561184	0.79	0.92	1.07
2-Hydroxy-2-methylbutanedioic acid	ME561159	0.87	0.94	1.17
Imidazoleacetic acid	ME561063	0.89	0.95	1.12
glucosamine	ME561091	0.89	0.99	1.13
N6-Acetyl-L-lysine	ME561093	0.87	0.99	1.12
ATP_neg	ME561206	0.76	1.04	1.09
N-acetyl-glutamine	ME561094	0.82	1.04	1.16
N-carbamoyl-L-aspartate	ME561090	0.80	0.98	1.12
Pyroglutamic acid	ME561146	0.83	1.00	1.09
oxaloacetate	ME561150	0.78	1.07	1.28
thymine	ME561064	0.88	1.07	1.25
Hydroxyisocaproic acid	ME561151	0.90	0.95	1.32
2-hydroxygluterate	ME561211	0.81	0.93	1.24
N-acetyl-glutamate	ME561095	0.84	0.93	1.23
1,3-diphopshateglycerate	ME561192	0.66	0.97	1.04
homocysteine	ME561073	0.70	1.07	1.19
ADP_neg	ME561202	0.56	1.07	1.14
dGDP_neg	ME561203	0.57	1.04	1.15
fructose-1,6-bisphosphate	ME561197	0.68	1.00	1.46
4-aminobutyrate	ME561050	0.67	0.95	1.38
shikimate	ME561173	0.69	0.96	1.36
GTP_neg	ME561207	0.59	0.78	1.24
glycerate	ME561136	0.64	0.91	1.22
Xanthurenic acid	ME561182	0.58	0.95	1.22
glucose-1-phosphate	ME561190	0.72	0.91	1.17
p-hydroxybenzoate	ME561156	0.74	0.88	1.26
deoxyguanosine	ME561109	0.70	0.90	1.25
citrate	ME561181	0.72	0.90	1.25
citrate-isocitrate	ME561179	0.71	0.91	1.26
D-glucosamine-1-phosphate	ME561106	1.49	0.80	0.85
histidinol	ME561075	1.39	0.73	0.69
S-adenosyl-L-methioninamine	ME561120	1.49	0.80	0.66
2-deoxyglucose-6-phosphate	ME561210	1.43	0.88	0.52
guanosine	ME561112	1.50	1.02	0.66
Glucose	ME561128	1.69	0.80	1.01
coenzyme A_pos	ME561125	1.49	1.00	0.97
deoxyadenosine	ME561103	1.45	0.98	0.92
taurine	ME561145	1.28	0.67	0.36
Cystine	ME561100	1.01	1.00	0.67
Glucose_neg	ME561212	1.02	0.94	0.60
threonine	ME561057	1.10	0.95	0.59
pyridoxine	ME561085	1.14	0.92	0.86
riboflavin	ME561122	1.09	0.94	0.85
uracil	ME561137	1.16	1.03	0.76
serine	ME561051	1.08	0.97	0.72
histidine	ME561081	1.13	0.96	0.74
ribose-phosphate	ME561186	1.14	0.91	0.75
lysine	ME561076	1.21	0.94	0.19
purine	ME561059	1.15	0.94	0.33
valine	ME561056	1.15	0.97	0.36
Glucose-H2O	ME561129	1.13	1.04	0.49
tyrosine	ME561092	1.08	1.03	0.50
indole	ME561055	1.16	0.89	0.43
methionine	ME561080	1.20	0.91	0.48
Methylcysteine	ME561072	1.17	0.93	0.51
phenylalanine	ME561084	1.14	0.96	0.50
tryptophan	ME561097	1.08	0.94	0.43
adenine	ME561071	1.07	0.89	0.49
cysteine	ME561060	1.00	0.89	0.48
uridine	ME561187	1.10	0.14	0.11
cytidine	ME561101	1.77	0.18	0.12
hypoxanthine	ME561153	1.53	0.09	0.02
methylnicotinamide	ME561074	1.42	0.09	0.02
deoxyinosine	ME561188	2.05	0.93	0.81
anthranilate	ME561154	1.89	0.99	0.66
p-aminobenzoate	ME561155	1.93	0.94	0.59
cholesteryl sulfate	ME561205	3.01	0.73	0.33
GMP	ME561121	2.57	0.74	0.65
acadesine	ME561105	0.13	0.64	4.40
7-methylguanosine	ME561115	0.73	1.06	2.26
malate	ME561152	0.72	0.89	2.00
CMP	ME561118	0.85	1.00	2.56
N-Acetyl-L-alanine	ME561149	0.46	1.09	2.42
deoxyuridine	ME561185	0.33	1.11	3.52
1-Methyladenosine	ME561111	0.68	0.96	3.19
cytosine	ME561052	0.51	1.13	3.17
S-methyl-5-thioadenosine	ME561114	0.34	1.73	3.47
2-ketohaxanoic acid	ME561148	0.32	1.47	2.83
adenosine	ME561110	0.65	1.53	3.14

Factors:

F1	Treatment:media post 10hr cell activation
F2	Treatment:media post 30hr cell activation
F3	Treatment:media post 48hr cell activation

Data matrix